Evidence map›Paper›PMID 20570404›Full record

SynthesisNeurobiology of aging2012

Association of CLU and PICALM variants with Alzheimer's disease.

M Ilyas Kamboh, Ryan L Minster, F Yesim Demirci, Mary Ganguli, Steven T Dekosky, Oscar L Lopez, M Michael Barmada

Abstract readMeta-Analysis
In one paragraph

Synthesis in Neurobiology of aging, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 13 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 13 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 13 syntheses or guidelines pooled it, 76 citations in OpenAlex.

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  5. Association between CLU gene rs11136000 polymorphism and Alzheimer's disease: an updated meta-analysis.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2018
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  14. Article
  15. Admixture mapping identifies novel Alzheimer's disease risk regions in African Americans.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2023
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

M Ilyas KambohDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, PA 15261, United States. kamboh@pitt.edu
Ryan L Minster
F Yesim Demirci
Mary Ganguli
Steven T Dekosky
Oscar L Lopez
M Michael Barmada
University of Pittsburgh · USUniversity of Virginia · US

Funding

TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SWEET, ROBERT A · 1985 to 2019
$43.0M
Mild Cognitive Impairment: A Prospective Community StudyR01AG023651 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GANGULI, MARY · 2005 to 2020
$27.1M
Mild Cognitive Impairment: A Prospective Community StudyR37AG023651 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Carmen Andreescu, MARY GANGULI · 2021 to 2026
$18.2M
Search for the Alzheimers GenesR01AG030653 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2009 to 2019
$7.7M
Predictors of Alheimers Disease in Mild Cognitive ImpairmentR01AG020098 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LOPEZ, OSCAR L. · 2002 to 2011
$3.7M
Outcomes and Predictors in Mild Cognitive ImpairmentK24AG022035 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GANGULI, MARY · 2003 to 2012
$1.3M
NIA NIH HHS AG005133NIA NIH HHS AG023651NIA NIH HHS AG030653NIA NIH HHS K24 AG022035NIA NIH HHS P50 AG005133NIA NIH HHS R01 AG020098NIA NIH HHS R01 AG023651NIA NIH HHS R01 AG030653NIA NIH HHS R37 AG023651
6 · The paper itself

Abstract

Two recent large genome-wide association studies have reported significant associations in the CLU (APOJ), CR1, and PICALM genes with the risk of Alzheimer's disease (AD). In order to replicate these findings, we examined 7 single nucleotide polymorphisms (SNPs) most significantly implicated by these studies in a large case-control sample comprising 2707 individuals. Principle components analysis revealed no population substructure in our sample. While no association was observed with CR1 SNPs (p = 0.30-0.457), a trend of association was seen with the PICALM (p = 0.071-0.086) and CLU (p = 0.148-0.258) SNPs. A meta-analysis of 3 studies revealed significant associations with all 3 genes. Our data from an independent and large case-control sample suggest that these gene regions should be followed up by comprehensive resequencing to find functional variants.

Indexed as

AgedAlzheimer DiseaseCase-Control StudiesClusterinFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansMaleMonomeric Clathrin Assembly ProteinsPolymorphism, Single NucleotideCLU protein, humanClusterinMonomeric Clathrin Assembly ProteinsPICALM protein, human

Identifiers

PMID20570404
PMCPMC3010357
OpenAlexW2065237064

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.