Evidence map›Paper›PMID 20570310›Full record

ArticleVirology2010

Domain- and nucleotide-specific Rev response element regulation of feline immunodeficiency virus production.

Hong Na, Willem Huisman, Kristofor K Ellestad, Tom R Phillips, Christopher Power

Abstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Hong NaDepartment of Medicine, University of Alberta, Edmonton, AB, Canada T6G 2S2.
Willem Huisman
Kristofor K Ellestad
Tom R Phillips
Christopher Power
University of Alberta · CAErasmus MC · NLWestern University of Health Sciences · US

Funding

PERIPHERAL NEUROPATHY IN LENTIVIRUS INFECTIONS: EARLY VIRAL AND HOST DETERMINANTSR01NS062670 · NINDS · UNIVERSITY OF ALBERTA · PI POWER, CHRISTOPHER · 2008 to 2010
$1.2M
CIHRNINDS NIH HHS R01 NS062670
6 · The paper itself

Abstract

Computational analysis of feline immunodeficiency virus (FIV) RNA sequences indicated that common FIV strains contain a rev response element (RRE) defined by a long unbranched hairpin with 6 stem-loop sub-domains, termed stem-loop A (SLA). To examine the role of the RNA secondary structure of the RRE, mutational analyses were performed in both an infectious FIV molecular clone and a FIV CAT-RRE reporter system. These studies disclosed that the stems within SLA (SA1, 2, 3, 4, and 5) of the RRE were critical but SA6 was not essential for FIV replication and CAT expression. These studies also revealed that the secondary structure rather than an antisense protein (ASP) mediates virus expression and replication in vitro. In addition, a single synonymous mutation within the FIV-RRE, SA3/45, reduced viral reverse transcriptase activity and p24 expression after transfection but in addition also showed a marked reduction in viral expression and production following infection.

Indexed as

AnimalsBase SequenceCatsCell LineGene Expression Regulation, ViralGenes, envImmunodeficiency Virus, FelineMolecular Sequence DataNucleic Acid ConformationProtein Structure, TertiaryRNA, ViralVirus ReplicationRNA, Viral

Identifiers

PMID20570310
PMCPMC2902707
OpenAlexW2083683916

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.