Evidence map›Paper›PMID 20568532›Full record

ArticlePolish journal of microbiology2010

Analysis of Helicobacter pylori genotypes in Afghani and Iranian isolates.

Hossein Dabiri, Mehdi Bolfion, Akbar Mirsalehian, Maryam Rezadehbashi, Fereshteh Jafari, Leila Shokrzadeh, Navid Sahebekhtiari, Homayon Zojaji, Yoshio Yamaoka, Darioush Mirsattari and 1 more

Open access · goldAbstract read
In one paragraph

Article in Polish journal of microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Analysis ofGastroenterology research · 2018
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Helicobacter pylori in Iran: A systematic review on the association of genotypes and gastroduodenal diseases.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2012
    Article
  9. Article
  10. Article
  11. Comparison of the virulence markers of Helicobacter pylori and their associated diseases in patients from Pakistan and Afghanistan.Saudi journal of gastroenterology : official journal of the Saudi Gastroenterology Association
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Hossein DabiriResearch Center for Gastroenterology and Liver Diseases, Shaheed Beheshti University, M.C., Tehran, Iran. hdabiri@razi.tums.ac.ir
Mehdi Bolfion
Akbar Mirsalehian
Maryam Rezadehbashi
Fereshteh Jafari
Leila Shokrzadeh
Navid Sahebekhtiari
Homayon Zojaji
Yoshio Yamaoka
Darioush Mirsattari
Mohammad Reza Zali
Shahid Beheshti University · IRTehran University of Medical Sciences · IRMichael E. DeBakey VA Medical Center · US

Funding

REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS R01 DK062813
6 · The paper itself

Abstract

The geographical variation in Helicobacter pylori genotypes is an observed phenomenon. Cytotoxin associated genes A (cagA) and E (cagE), and vacuolating cytotoxin (vacA) genotypes of H. pylori are associated with peptic ulcer disease (PUD). This study compared the distribution of these genotypes in Iranian and Afghani isolates and their association with clinical outcomes. H. pylori infected patients, as proven by positive culture, were recruited prospectively. A total of 70 patients, 55 Iranian (26 men and 29 women, mean age 48 +/- 18 years) and 15 Afghani immigrants (13 men and 2 women, mean age 34.8 +/- 11 years) living in Tehran, Iran were enrolled in this study. DNA was extracted from isolated H. pylori and polymerase chain reaction was carried out to determine the cagA and cagE status and vacA alleles. The number of gastric cancer, peptic ulcer and gastritis cases was 11, 23 and 36, respectively. The cagA positive isolates were more common in Iranian (67%) than Afghani isolates (60%). cagE was positive in 53% of Afghani compared to 51% of Iranian isolates. The most common vacA s-region genotype was s1; 80% in Afghani and 67% in Iranian. The slml was a frequently observed genotype in Afghani strains (53%) while s1m2 (47%) was more common in strains isolated from Iranian patients. There is a difference in the H. pylori strains between Iranian and Afghani groups, for instance Iranian isolates were similar to European isolates while Afghani isolates were similar to isolates from India. However, there was no significant association between cagA, cagE and vacA genotypes and clinical outcomes in Iranian and Afghani patients.

Indexed as

AdultAfghanistanAgedAntigens, BacterialBacterial ProteinsFemaleGenotypeHelicobacter pyloriHumansIranMaleMiddle AgedAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriPicB protein, Helicobacter pyloriVacA protein, Helicobacter pylori

Identifiers

PMID20568532
PMCPMC3126918
OpenAlexW2097659877

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.