Evidence map›Paper›PMID 20566705›Full record

ArticlePlant physiology2010

Functional analysis of the Arabidopsis PAL gene family in plant growth, development, and response to environmental stress.

Junli Huang, Min Gu, Zhibing Lai, Baofang Fan, Kai Shi, Yan-Hong Zhou, Jing-Quan Yu, Zhixiang Chen

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 419 papers.

0numbers the graph read from it
0cells of the map it votes in
419citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

419 citing papers in PubMed, 955 citations in OpenAlex.

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  15. A dual role ofScience advances · 2026
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  19. Grapevine LysM-containing receptor-like kinaseFrontiers in plant science · 2026
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359 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Junli HuangDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana 47907-2054, USA.
Min Gu
Zhibing Lai
Baofang Fan
Kai Shi
Yan-Hong Zhou
Jing-Quan Yu
Zhixiang Chen
Purdue University West Lafayette · USZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenylalanine ammonia-lyase (PAL) catalyzes the first step of the phenylpropanoid pathway, which produces precursors to a variety of important secondary metabolites. Arabidopsis (Arabidopsis thaliana) contains four PAL genes (PAL1-PAL4), but there has been no genetic analysis to assess the biological functions of the entire gene family. Here, we report the generation and analysis of combined mutations for the four Arabidopsis PAL genes. Contrary to a previous report, we found that three independent pal1 pal2 double mutants were fertile and generated yellow seeds due to the lack of condensed tannin pigments in the seed coat. The pal1 pal2 double mutants were also deficient in anthocyanin pigments in various plant tissues, which accumulate in wild-type plants under stress conditions. Thus, PAL1 and PAL2 have a redundant role in flavonoid biosynthesis. Furthermore, the pal1 pal2 double mutants were more sensitive to ultraviolet-B light but more tolerant to drought than wild-type plants. We have also generated two independent pal1 pal2 pal3 pal4 quadruple knockout mutants, which are stunted and sterile. The quadruple knockout mutants still contained about 10% of the wild-type PAL activity, which might result from one or more leaky pal mutant genes or from other unknown PAL genes. The quadruple mutants also accumulated substantially reduced levels of salicylic acid and displayed increased susceptibility to a virulent strain of the bacterial pathogen Pseudomonas syringae. These results provide further evidence for both distinct and overlapping roles of the Arabidopsis PAL genes in plant growth, development, and responses to environmental stresses.

Indexed as

Multigene FamilyAnthocyaninsArabidopsisArabidopsis ProteinsFlavonoidsGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGene Knockout TechniquesMutagenesis, InsertionalMutationPhenylalanine Ammonia-LyasePseudomonas syringaeRNA, PlantStress, PhysiologicalUltraviolet RaysAnthocyaninsArabidopsis ProteinsFlavonoidsPhenylalanine Ammonia-LyaseRNA, Plant

Identifiers

PMID20566705
PMCPMC2923909
OpenAlexW2075279785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.