Evidence map›Paper›PMID 20566627›Full record

ArticleThe Journal of biological chemistry2010

GTP-independent tRNA delivery to the ribosomal P-site by a novel eukaryotic translation factor.

Sergey E Dmitriev, Ilya M Terenin, Dmitri E Andreev, Pavel A Ivanov, Jacov E Dunaevsky, William C Merrick, Ivan N Shatsky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 167 citations in OpenAlex.

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47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sergey E DmitrievBelozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119992, Russia.
Ilya M TereninBelozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119992, Russia.
Dmitri E AndreevBelozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119992, Russia.
Pavel A IvanovFaculty of Biology, Moscow State University, Moscow 119992, Russia.
Jacov E DunaevskyBelozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119992, Russia.
William C MerrickDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106.
Ivan N ShatskyBelozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow 119992, Russia. Electronic address: shatsky@genebee.msu.su.
Lomonosov Moscow State University · RUCase Western Reserve University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During translation, aminoacyl-tRNAs are delivered to the ribosome by specialized GTPases called translation factors. Here, we report the tRNA binding to the P-site of 40 S ribosomes by a novel GTP-independent factor eIF2D isolated from mammalian cells. The binding of tRNA(i)(Met) occurs after the AUG codon finds its position in the P-site of 40 S ribosomes, the situation that takes place during initiation complex formation on the hepatitis C virus internal ribosome entry site or on some other specific RNAs (leaderless mRNA and A-rich mRNAs with relaxed scanning dependence). Its activity in tRNA binding with 40 S subunits does not require the presence of the aminoacyl moiety. Moreover, the factor possesses the unique ability to deliver non-Met (elongator) tRNAs into the P-site of the 40 S subunit. The corresponding gene is found in all eukaryotes and includes an SUI1 domain present also in translation initiation factor eIF1. The versatility of translation initiation strategies in eukaryotes is discussed.

Indexed as

Codon, InitiatorEukaryotic Initiation Factor-2Eukaryotic Initiation FactorsGuanosine TriphosphateHeLa CellsHepacivirusHumansNeoplasm ProteinsNerve Tissue ProteinsProtein BiosynthesisRibosome Subunits, Small, EukaryoticRNA, Transfer, Amino AcylRNA, Transfer, MetRNA, ViralCodon, InitiatorEIF1 protein, humaneIF2D protein, humanEukaryotic Initiation Factor-2Eukaryotic Initiation FactorsGuanosine TriphosphateNeoplasm ProteinsNerve Tissue ProteinsRNA, Transfer, Amino AcylRNA, Transfer, MetRNA, Viral

Identifiers

PMID20566627
PMCPMC2930676
OpenAlexW2121305410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.