Evidence map›Paper›PMID 20566327›Full record

ArticleFree radical biology & medicine2010

Cord blood genomic analysis highlights the role of redox balance.

Jill L Maron, Kirby L Johnson, Christopher Parkin, Lakshamanan Iyer, Jonathan M Davis, Diana W Bianchi

Abstract read
In one paragraph

Article in Free radical biology & medicine, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Is Oxytocin "Nature's Medicine"?Pharmacological reviews · 2020
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Performing discovery-driven neonatal research by transcriptomic analysis of routinely discarded biofluids.The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians · 2012
    Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jill L MaronDivision of Newborn Medicine, Department of Pediatrics, Floating Hospital for Children at Tufts Medical Center, Boston, MA 02111, USA. jmaron@tuftsmedicalcenter.org
Kirby L Johnson
Christopher Parkin
Lakshamanan Iyer
Jonathan M Davis
Diana W Bianchi
Tufts Children's Hospital · USTufts Medical Center · USTufts University · US

Funding

TUSM/T-NEMC CENTER FOR NEUROSCIENCE RESEARCH - Imaging CoreP30NS047243 · NINDS · TUFTS UNIVERSITY BOSTON · PI JACKSON, F ROB · 2003 to 2017
$10.0M
Feto-Maternal DNA/RNA Trafficking:Biology &ApplicationsR01HD042053 · NICHD · TUFTS MEDICAL CENTER · PI BIANCHI, DIANA W. · 2004 to 2013
$3.2M
NICHD NIH HHS R01 HD042053NICHD NIH HHS R01 HD042503-07NINDS NIH HHS P30 NS047243
6 · The paper itself

Abstract

Neonates are exposed to elevated levels of reactive oxygen species as they transition from a hypoxic intrauterine to a normoxic extrauterine environment at birth. This increased oxidative stress is associated with neonatal morbidity. Current antioxidant supplementation treatment strategies have yet to translate into improved neonatal outcomes. Our understanding of a newborn's intricate redox balance, particularly at the genomic level, remains limited. Here, we performed genomic microarray analyses (approximately 14,500 genes) on extracted mRNA from umbilical cord whole blood at term gestation (n=10). Bioinformatic analyses identified 282 genes (2.0%) that were consistently present within the highest quintile of expressed genes. These genes were highly associated with oxidant stress and included superoxide dismutase 1, catalase, peroxiredoxins, and uncoupling proteins. Pathway analyses identified statistically significantly overrepresented functional pathways including "oxidative stress," "oxidative stress response mediated by nuclear factor-erythroid 2-related factor," "hypoxia-inducible factor signaling," and "mitochondrial dysfunction" (p<0.05). These results suggest that neonates require high levels of antioxidants and an intricate cellular redox balance to ensure a successful transition to the extrauterine environment. Understanding the genes necessary to maintain this delicate redox balance may lead to the development of alternative treatment strategies.

Indexed as

Oxidative StressCatalaseCells, CulturedFemaleFetal BloodGenomeHumansInfant, NewbornMaleMicroarray AnalysisNF-E2 Transcription FactorOxidation-ReductionPeroxiredoxinsSignal TransductionSuperoxide DismutaseSuperoxide Dismutase-1CatalaseNF-E2 Transcription FactorPeroxiredoxinsSOD1 protein, humanSuperoxide DismutaseSuperoxide Dismutase-1

Identifiers

PMID20566327
PMCPMC2921475
OpenAlexW2015386884

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.