Evidence map›Paper›PMID 20558712›Full record

ArticleScience (New York, N.Y.)2010

Target RNA-directed trimming and tailing of small silencing RNAs.

Stefan L Ameres, Michael D Horwich, Jui-Hung Hung, Jia Xu, Megha Ghildiyal, Zhiping Weng, Phillip D Zamore

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 369 papers.

0numbers the graph read from it
0cells of the map it votes in
369citing papers in PubMed
19.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

369 citing papers in PubMed, 598 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. HENMT1: an RNA methyltransferase in biology and disease.Journal of Zhejiang University. Science. B · 2026
    Review
  11. Article
  12. Article
  13. The history and function of a circular RNA.Nature communications · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Genes & development · 2026
    Article
  18. Article
  19. Review
  20. Molecular Analysis of miRNA Stability and Decay Dynamics by Northern Blot.Methods in molecular biology (Clifton, N.J.) · 2026
    Article

309 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Stefan L AmeresHoward Hughes Medical Institute and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Michael D Horwich
Jui-Hung Hung
Jia Xu
Megha Ghildiyal
Zhiping Weng
Phillip D Zamore
Boston University · USUniversity of Massachusetts Chan Medical School · US

Funding

Understanding the Mechanism of RNA InterferenceR37GM062862 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2010 to 2019
$5.3M
Understanding microRNA Biogenesis and FunctionR01GM065236 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2003 to 2014
$5.0M
Understanding the Mechanism of RNA Interference (RNAi)R01GM062862 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2001 to 2009
$3.2M
Experimental Identification of miR-14 Target mRNAsF30AG030283 · NIA · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HORWICH, MICHAEL DEXTER · 2007 to 2010
$101k
Austrian Science Fund FWF J 2832Howard Hughes Medical InstituteNIA NIH HHS F30AG030283NIGMS NIH HHS GM62862NIGMS NIH HHS GM65236NIGMS NIH HHS R01 GM065236NIGMS NIH HHS R37 GM062862
6 · The paper itself

Abstract

In Drosophila, microRNAs (miRNAs) typically guide Argonaute1 to repress messenger RNA (mRNA), whereas small interfering RNAs (siRNAs) guide Argonaute2 to destroy viral and transposon RNA. Unlike siRNAs, miRNAs rarely form extensive numbers of base pairs to the mRNAs they regulate. We find that extensive complementarity between a target RNA and an Argonaute1-bound miRNA triggers miRNA tailing and 3'-to-5' trimming. In flies, Argonaute2-bound small RNAs--but not those bound to Argonaute1--bear a 2'-O-methyl group at their 3' ends. This modification blocks target-directed small RNA remodeling: In flies lacking Hen1, the enzyme that adds the 2'-O-methyl group, Argonaute2-associated siRNAs are tailed and trimmed. Target complementarity also affects small RNA stability in human cells. These results provide an explanation for the partial complementarity between animal miRNAs and their targets.

Indexed as

Base PairingRNA StabilityAnimalsArgonaute ProteinsCell LineDrosophila melanogasterDrosophila ProteinsEukaryotic Initiation FactorsGreen Fluorescent ProteinsHumansMethylationMethyltransferasesMicroRNAsModels, BiologicalRNA CapsRNA, ComplementaryAGO1 protein, DrosophilaAGO2 protein, DrosophilaArgonaute Proteinsbantam microRNA, DrosophilaDrosophila Proteinsenhanced green fluorescent proteinEukaryotic Initiation FactorsGreen Fluorescent ProteinsHen1 protein, DrosophilaLet-7 microRNA, DrosophilaMethyltransferasesMicroRNAsRNA CapsRNA, ComplementaryRNA-Induced Silencing ComplexRNA, MessengerRNA, Small Interfering

Identifiers

PMID20558712
PMCPMC2902985
OpenAlexW2032964111

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.