Evidence map›Paper›PMID 20552027›Full record

ArticlePloS one2010

Host and viral genetic correlates of clinical definitions of HIV-1 disease progression.

Concepción Casado, Sara Colombo, Andri Rauch, Raquel Martínez, Huldrych F Günthard, Soledad Garcia, Carmen Rodríguez, Jorge Del Romero, Amalio Telenti, Cecilio López-Galíndez

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 87 citations in OpenAlex.

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  4. The HIV-1 Vpr R77Q mutant alters host apoptotic gene regulation in CD4+ T cells.Frontiers in cellular and infection microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Concepción CasadoCentro Nacional de Microbiología, Instituto de Salud Carlos III, Madrid, Spain.
Sara Colombo
Andri Rauch
Raquel Martínez
Huldrych F Günthard
Soledad Garcia
Carmen Rodríguez
Jorge Del Romero
Amalio Telenti
Cecilio López-Galíndez
Comunidad de Madrid · ESUniversity of Lausanne · CHCentro Nacional de Microbiologia · ESInstituto de Salud Carlos III · ESUniversity Hospital of Bern · CHUniversity Hospital of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVarious patterns of HIV-1 disease progression are described in clinical practice and in research. There is a need to assess the specificity of commonly used definitions of long term non-progressor (LTNP) elite controllers (LTNP-EC), viremic controllers (LTNP-VC), and viremic non controllers (LTNP-NC), as well as of chronic progressors (P) and rapid progressors (RP). METHODOLOGY AND PRINCIPAL

findingsWe re-evaluated the HIV-1 clinical definitions, summarized in Table 1, using the information provided by a selected number of host genetic markers and viral factors. There is a continuous decrease of protective factors and an accumulation of risk factors from LTNP-EC to RP. Statistical differences in frequency of protective HLA-B alleles (p-0.01), HLA-C rs9264942 (p-0.06), and protective CCR5/CCR2 haplotypes (p-0.02) across groups, and the presence of viruses with an ancestral genotype in the "viral dating" (i.e., nucleotide sequences with low viral divergence from the most recent common ancestor) support the differences among principal clinical groups of HIV-1 infected individuals.

conclusionsA combination of host genetic and viral factors supports current clinical definitions that discriminate among patterns of HIV-1 progression. The study also emphasizes the need to apply a standardized and accepted set of clinical definitions for the purpose of disease stratification and research.

Indexed as

Disease ProgressionGenes, envHaplotypesHIV-1HIV InfectionsHIV Long-Term SurvivorsHLA-B AntigensHumansPhylogenyPolymerase Chain ReactionReceptors, CCR2Receptors, CCR5Risk FactorsViral LoadCCR2 protein, humanHLA-B AntigensReceptors, CCR2Receptors, CCR5

Identifiers

PMID20552027
PMCPMC2884031
OpenAlexW2042815830

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.