Evidence map›Paper›PMID 20549724›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2010

Jarid2 is among a set of genes differentially regulated by Nkx2.5 during outflow tract morphogenesis.

Jeremy L Barth, Christopher D Clark, Victor M Fresco, Ellen P Knoll, Benjamin Lee, W Scott Argraves, Kyu-Ho Lee

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Epigenetic Mechanisms in Heart Diseases.Reviews in cardiovascular medicine · 2025
    Review
  6. The molecular mechanisms of cardiac development and related diseases.Signal transduction and targeted therapy · 2024
    Review
  7. Review
  8. Epigenetic function during heroin self-administration controls future relapse-associated behavior in a cell type-specific manner.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Article
  11. Epigenetics in Congenital Heart Disease.Journal of the American Heart Association · 2022
    Review
  12. Article
  13. Review
  14. Article
  15. Role of Nkx2.5 in HCell stress & chaperones · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jeremy L BarthRegenerative Medicine and Cell Biology Department, Medical University of South Carolina,173 Ashley Avenue, Charleston, SC 29425, USA.
Christopher D Clark
Victor M Fresco
Ellen P Knoll
Benjamin Lee
W Scott Argraves
Kyu-Ho Lee
Medical University of South Carolina · US

Funding

UBIQUITIN CARBOXYL TERMINAL HYDROLASE L1 (UCH-L1) AND VASCULAR LESION FORMATIONP20RR016434 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI MARKWALD, ROGER R · 2001 to 2011
$24.8M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
Fibulin-1 Regulation of the DiGeorge Syndrome Pathogenesis PathwayR01HL095067 · NHLBI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI ARGRAVES, WILLIAM SCOTT · 2009 to 2012
$1.5M
NCRR NIH HHS P20 RR016434NCRR NIH HHS UL1 RR029882NHLBI NIH HHS HL095067NHLBI NIH HHS R01 HL095067
6 · The paper itself

Abstract

Nkx2.5, a transcription factor implicated in human congenital heart disease, is required for regulation of second heart field (SHF) progenitors contributing to outflow tract (OFT). Here, we define a set of genes (Lrrn1, Elovl2, Safb, Slc39a6, Khdrbs1, Hoxb4, Fez1, Ccdc117, Jarid2, Nrcam, and Enpp3) expressed in SHF containing pharyngeal arch tissue whose regulation is dependent on Nkx2.5. Further investigation shows that Jarid2, which has been implicated in OFT morphogenesis, is a direct target of Nkx2.5 regulation. Jarid2 expression was up-regulated in SHF mesoderm of Nkx2.5-deficient embryos. Chromatin immunoprecipitation analysis showed Nkx2.5 interaction with consensus binding sites in the Jarid2 promoter in pharyngeal arch cells. Finally, Jarid2 promoter activity and mRNA expression levels were down-regulated by Nkx2.5 overexpression. Given the role of Jarid2 as a regulator of early cardiac proliferation, these findings highlight Jarid2 as one of several potential mediators of the critical role played by Nkx2.5 during OFT morphogenesis.

Indexed as

AnimalsBinding SitesBranchial RegionCell Line, TumorChromatin ImmunoprecipitationEndodermHeartHeart VentriclesHomeobox Protein Nkx-2.5Homeodomain ProteinsIn Situ HybridizationMesodermMiceMice, KnockoutNerve Tissue ProteinsOligonucleotide Array Sequence AnalysisHomeobox Protein Nkx-2.5Homeodomain ProteinsJarid2 protein, mouseNerve Tissue ProteinsNkx2-5 protein, mousePolycomb Repressive Complex 2Transcription Factors

Identifiers

PMID20549724
PMCPMC2903008
OpenAlexW2010318237

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.