Evidence map›Paper›PMID 20548961›Full record

ArticlePLoS genetics2010

Mice with alopecia, osteoporosis, and systemic amyloidosis due to mutation in Zdhhc13, a gene coding for palmitoyl acyltransferase.

Amir N Saleem, Yen-Hui Chen, Hwa Jin Baek, Ya-Wen Hsiao, Hong-Wen Huang, Hsiao-Jung Kao, Kai-Ming Liu, Li-Fen Shen, I-Wen Song, Chen-Pei D Tu and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 74 citations in OpenAlex.

  1. Pooled it
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  15. Effects ofJournal of public health in Africa · 2023
    Article
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  17. Insights into auto-RSC chemical biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Amir N SaleemInstitute of Biomedical Sciences, Academia Sinica, Nankang, Taiwan.
Yen-Hui Chen
Hwa Jin Baek
Ya-Wen Hsiao
Hong-Wen Huang
Hsiao-Jung Kao
Kai-Ming Liu
Li-Fen Shen
I-Wen Song
Chen-Pei D Tu
Jer-Yuarn Wu
Tateki Kikuchi
Monica J Justice
Jeffrey J Y Yen
Yuan-Tsong Chen
Institute of Biomedical Sciences, Academia Sinica · TWBaylor College of Medicine · USPennsylvania State University · USUniversity of Mosul · IQ

Funding

MUTATIONS IN DEVELOPMENTAL PATHWAYS BY ENU MUTAGENESISU01HD039372 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI JUSTICE, MONICA JEAN · 2000 to 2005
$17.3M
Genetic analysis of mouse chromosome 11R01CA115503 · NCI · BAYLOR COLLEGE OF MEDICINE · PI JUSTICE, MONICA J. · 2006 to 2010
$2.6M
NCI NIH HHS R01 CA115503NCI NIH HHS R01CA115503NICHD NIH HHS U01 HD039372NICHD NIH HHS U01HD39372
6 · The paper itself

Abstract

Protein palmitoylation has emerged as an important mechanism for regulating protein trafficking, stability, and protein-protein interactions; however, its relevance to disease processes is not clear. Using a genome-wide, phenotype driven N-ethyl-N-nitrosourea-mediated mutagenesis screen, we identified mice with failure to thrive, shortened life span, skin and hair abnormalities including alopecia, severe osteoporosis, and systemic amyloidosis (both AA and AL amyloids depositions). Whole-genome homozygosity mapping with 295 SNP markers and fine mapping with an additional 50 SNPs localized the disease gene to chromosome 7 between 53.9 and 56.3 Mb. A nonsense mutation (c.1273A>T) was located in exon 12 of the Zdhhc13 gene (Zinc finger, DHHC domain containing 13), a gene coding for palmitoyl transferase. The mutation predicted a truncated protein (R425X), and real-time PCR showed markedly reduced Zdhhc13 mRNA. A second gene trap allele of Zdhhc13 has the same phenotypes, suggesting that this is a loss of function allele. This is the first report that palmitoyl transferase deficiency causes a severe phenotype, and it establishes a direct link between protein palmitoylation and regulation of diverse physiologic functions where its absence can result in profound disease pathology. This mouse model can be used to investigate mechanisms where improper palmitoylation leads to disease processes and to understand molecular mechanisms underlying human alopecia, osteoporosis, and amyloidosis and many other neurodegenerative diseases caused by protein misfolding and amyloidosis.

Indexed as

MutationAcyltransferasesAgingAlopeciaAmyloidosisAnimalsBase SequenceGene Expression RegulationImmunohistochemistryMiceOrgan SpecificityOsteoporosisPhenotypeAcyltransferasesZDHHC13 protein, humanZdhhc13 protein, mouse

Identifiers

PMID20548961
PMCPMC2883605
OpenAlexW2025673519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.