Evidence map›Paper›PMID 20548952›Full record

ArticlePLoS genetics2010

Inactivation of hnRNP K by expanded intronic AUUCU repeat induces apoptosis via translocation of PKCdelta to mitochondria in spinocerebellar ataxia 10.

Misti C White, Rui Gao, Weidong Xu, Santi M Mandal, Jung G Lim, Tapas K Hazra, Maki Wakamiya, Sharon F Edwards, Salmo Raskin, Hélio A G Teive and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 111 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Repeat-associated non-AUG translation induces cytoplasmic aggregation of CAG repeat-containing RNAs.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. DNAzyme Cleavage of CAG Repeat RNA in Polyglutamine Diseases.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2021
    Article
  17. Ataxin-10 Inhibits TNF-Mediators of inflammation · 2021
    Article
  18. Stress granule subtypes: an emerging link to neurodegeneration.Cellular and molecular life sciences : CMLS · 2020
    Review
  19. Article
  20. Small molecule targeting of RNA structures in neurological disorders.Annals of the New York Academy of Sciences · 2020
    Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Misti C WhiteDepartment of Neurology, University of Texas Medical Branch, Galveston, Texas, USA.
Rui Gao
Weidong Xu
Santi M Mandal
Jung G Lim
Tapas K Hazra
Maki Wakamiya
Sharon F Edwards
Salmo Raskin
Hélio A G Teive
Huda Y Zoghbi
Partha S Sarkar
Tetsuo Ashizawa
The University of Texas Medical Branch at Galveston · USHoward Hughes Medical Institute · USPontifícia Universidade Católica do Paraná · BRUniversidade Federal do Paraná · BR

Funding

MOLECULAR STUDIES OF SPINOCEREBELLAR ATAXIA TYPE 1R01NS027699 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI HUDA Y ZOGHBI · 1989 to 2026
$8.8M
MOLECULAR STUDIES OF SPINOCEREBELLAR ATAXIS TYPE IR37NS027699 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZOGHBI, HUDA Y · 2015 to 2021
$2.8M
Spinocerebellar Ataxia Type 10R01NS041547 · NINDS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ASHIZAWA, TETSUO · 2001 to 2009
$2.5M
Repair of oxidative damage in mammalian genomesR01CA102271 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI HAZRA, TAPAS K · 2005 to 2010
$1.4M
NCI NIH HHS CA102271NCI NIH HHS R01 CA102271NINDS NIH HHS NS27699NINDS NIH HHS R01 NS027699NINDS NIH HHS R01 NS041547NINDS NIH HHS R37 NS027699
6 · The paper itself

Abstract

We have identified a large expansion of an ATTCT repeat within intron 9 of ATXN10 on chromosome 22q13.31 as the genetic mutation of spinocerebellar ataxia type 10 (SCA10). Our subsequent studies indicated that neither a gain nor a loss of function of ataxin 10 is likely the major pathogenic mechanism of SCA10. Here, using SCA10 cells, and transfected cells and transgenic mouse brain expressing expanded intronic AUUCU repeats as disease models, we show evidence for a key pathogenic molecular mechanism of SCA10. First, we studied the fate of the mutant repeat RNA by in situ hybridization. A Cy3-(AGAAU)(10) riboprobe detected expanded AUUCU repeats aggregated in foci in SCA10 cells. Pull-down and co-immunoprecipitation data suggested that expanded AUUCU repeats within the spliced intronic sequence strongly bind to hnRNP K. Co-localization of hnRNP K and the AUUCU repeat aggregates in the transgenic mouse brain and transfected cells confirmed this interaction. To examine the impact of this interaction on hnRNP K function, we performed RT-PCR analysis of a splicing-regulatory target of hnRNP K, and found diminished hnRNP K activity in SCA10 cells. Cells expressing expanded AUUCU repeats underwent apoptosis, which accompanied massive translocation of PKCdelta to mitochondria and activation of caspase 3. Importantly, siRNA-mediated hnRNP K deficiency also caused the same apoptotic event in otherwise normal cells, and over-expression of hnRNP K rescued cells expressing expanded AUUCU repeats from apoptosis, suggesting that the loss of function of hnRNP K plays a key role in cell death of SCA10. These results suggest that the expanded AUUCU-repeat in the intronic RNA undergoes normal transcription and splicing, but causes apoptosis via an activation cascade involving a loss of hnRNP K activities, massive translocation of PKCdelta to mitochondria, and caspase 3 activation.

Indexed as

ApoptosisRepetitive Sequences, Nucleic AcidAtaxin-10Cell LineHeterogeneous-Nuclear Ribonucleoprotein KHumansIntronsMitochondriaNerve Tissue ProteinsProtein BindingProtein Kinase C-deltaProtein TransportTranscription, GeneticAtaxin-10ATXN10 protein, humanHeterogeneous-Nuclear Ribonucleoprotein KNerve Tissue ProteinsProtein Kinase C-delta

Identifiers

PMID20548952
PMCPMC2883596
OpenAlexW2074525195

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.