Evidence map›Paper›PMID 20546246›Full record

ArticleCell proliferation2010

Global gene expression reveals a set of new genes involved in the modification of cells during erythroid differentiation.

A F da Cunha, A F Brugnerotto, A S Duarte, C Lanaro, G G L Costa, S T O Saad, F F Costa

Abstract read
In one paragraph

Article in Cell proliferation, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Peroxiredoxins in erythrocytes: far beyond the antioxidant role.Journal of molecular medicine (Berlin, Germany) · 2023
    Review
  5. Review
  6. Article
  7. Article
  8. ERH Gene and Its Role in Cancer Cells.Frontiers in oncology · 2022
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

A F da CunhaDepartamento de Genética e Evolução, Centro de Ciências Biológicas e da Saúde, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil. anderf@ufscar.br
A F Brugnerotto
A S Duarte
C Lanaro
G G L Costa
S T O Saad
F F Costa
Universidade Estadual de Campinas (UNICAMP) · BRUniversidade Federal de São Carlos · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesErythroid differentiation is a dynamic process in which a pluripotent stem cell undergoes a series of developmental changes that commit it to a specific lineage. These alterations involve changes in gene expression profiles. In this study, gene expression profiles during differentiation of human erythroid cells of a normal blood donor were evaluated using SAGE. MATERIALS AND

methodsGlobal gene expression was evaluated in cells collected immediately before addition of erythropoietin (0 h) and 192 and 336 h after addition of this hormone. Real-time PCR was used to evaluate activation of differentially expressed genes.

resultsThe data indicate that global aspects of the transcriptome were similar during differentiation of the majority of the genes and that a relatively small set of genes is probably involved in modification of erythroid cells during differentiation. We have identified 93 differentially expressed genes during erythroid development, and expression of some of these was confirmed by qPCR. Various genes including EYA3, ERH, HES6, TIMELESS and TRIB3 were found to be homologous to those of Drosophila melanogaster and here are described for the first time during erythroid development. An important and unique carboxypeptidase inhibitor described in mammalians, LXN, was also identified.

conclusionsThe results of this study amplify previously published data and may contribute to comprehension of erythroid differentiation and identification of new target genes involved in some erythroid concerning diseases.

Indexed as

Gene Expression ProfilingAntigensBasic Helix-Loop-Helix ProteinsCell Cycle ProteinsCell DifferentiationCells, CulturedErythroid CellsErythropoietinGene Expression RegulationGenomeGlycoproteinsHumansIntracellular Signaling Peptides and ProteinsNuclear ProteinsProtein Serine-Threonine KinasesProtein Tyrosine PhosphatasesAntigensBasic Helix-Loop-Helix ProteinsCell Cycle ProteinsERH protein, humanErythropoietinEYA1 protein, humanGlycoproteinsHES6 protein, humanIntracellular Signaling Peptides and ProteinsLxn protein, ratNuclear ProteinsProtein Serine-Threonine KinasesProtein Tyrosine PhosphatasesRepressor ProteinsRNA, MessengerTIMELESS protein, humanTranscription FactorsTRIB3 protein, human

Identifiers

PMID20546246
PMCPMC6496675
OpenAlexW1509489125

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.