Evidence map›Paper›PMID 20542006›Full record

ArticleMolecular cell2010

Systematic analysis of essential genes reveals important regulators of G protein signaling.

Steven D Cappell, Rachael Baker, Dorota Skowyra, Henrik G Dohlman

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Microorganisms · 2022
    Review
  6. Article
  7. Regulation of large and small G proteins by ubiquitination.The Journal of biological chemistry · 2019
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Why are essential genes essential? - The essentiality ofMicrobial cell (Graz, Austria) · 2015
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Steven D CappellDepartment of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Rachael Baker
Dorota Skowyra
Henrik G Dohlman
University of North Carolina at Chapel Hill · USSaint Louis University · US

Funding

REGULATORS OF G PROTEIN SIGNALING IN YEASTR01GM059167 · NIGMS · YALE UNIVERSITY · PI DOHLMAN, HENRIK G. · 1999 to 2015
$3.7M
NIGMS NIH HHS R01 GM059167
6 · The paper itself

Abstract

The yeast pheromone pathway consists of a canonical heterotrimeric G protein and MAP kinase cascade. To identify additional signaling components, we systematically evaluated 870 essential genes using a library of repressible-promoter strains. Quantitative transcription-reporter and MAPK activity assays were used to identify strains that exhibit altered pheromone sensitivity. Of the 92 newly identified essential genes required for proper G protein signaling, those involved with protein degradation were most highly represented. Included in this group are members of the Skp, Cullin, F box (SCF) ubiquitin ligase complex. Further genetic and biochemical analysis reveals that SCF(Cdc4) acts together with the Cdc34 ubiquitin-conjugating enzyme at the level of the G protein; promotes degradation of the G protein alpha subunit, Gpa1, in vivo; and catalyzes Gpa1 ubiquitination in vitro. These insights to the G protein signaling network reveal the essential genome as an untapped resource for identifying new components and regulators of signal transduction pathways.

Indexed as

Anaphase-Promoting Complex-CyclosomeCell Cycle ProteinsCluster AnalysisF-Box ProteinsGene Expression ProfilingGene Expression Regulation, FungalGenome, FungalGTP-Binding Protein alpha Subunits, Gq-G11GTP-Binding Protein beta SubunitsGTP-Binding ProteinsHumansPhenotypePheromonesPromoter Regions, GeneticRecombinant Fusion ProteinsReproducibility of ResultsAnaphase-Promoting Complex-CyclosomeCDC34 protein, humanCDC34 protein, S cerevisiaeCDC4 protein, S cerevisiaeCell Cycle ProteinsF-Box ProteinsGPA1 protein, S cerevisiaeGTP-Binding Protein alpha Subunits, Gq-G11GTP-Binding Protein beta SubunitsGTP-Binding ProteinsPheromonesRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSKP Cullin F-Box Protein LigasesSte4 protein, S cerevisiaeUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligase ComplexesUbiquitin-Protein Ligases

Identifiers

PMID20542006
PMCPMC2919228
OpenAlexW2152487543

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.