Evidence map›Paper›PMID 20541536›Full record

ArticleBiochemical and biophysical research communications2010

APOBEC-1 complementation factor (ACF) forms RNA-dependent multimers.

C A Galloway, A Kumar, J Krucinska, H C Smith

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Emerging clinical applications of ADAR based RNA editing.Stem cells translational medicine · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Identification of DNA cleavage- and recombination-specific hnRNP cofactors for activation-induced cytidine deaminase.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  8. Article
  9. Role of the gut in lipid homeostasis.Physiological reviews · 2012
    Review
  10. Functions and regulation of the APOBEC family of proteins.Seminars in cell & developmental biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

C A GallowayUniversity of Rochester, School of Medicine and Dentistry, Department of Biochemistry and Biophysics, 601 Elmwood Ave., Rochester, NY 14642, USA.
A Kumar
J Krucinska
H C Smith
University of Rochester · US

Funding

METABOLIC REGULATION OF APOLIPOPROTEIN B MRNA EDITINGR01DK043739 · NIDDK · UNIVERSITY OF ROCHESTER · PI SMITH, HAROLD C · 1992 to 2003
$1.1M
Based deamination by CEM15 suppresses HIV-1 InfectivityR21AI058789 · NIAID · UNIVERSITY OF ROCHESTER · PI SMITH, HAROLD C · 2004 to 2005
$468k
NIAID NIH HHS AI058789NIAID NIH HHS R21 AI058789NIDDK NIH HHS DK043739NIDDK NIH HHS R01 DK043739
6 · The paper itself

Abstract

Limited proteolysis of APOBEC-1 complementation factor (ACF) and computational secondary structure modeling were used to guide the construction of a well-folded, truncation protein spanning residues 1-320 and containing three RNA recognition motifs (RRMs). ACF320 bound preferentially to apoB mRNA and supported APOBEC-1 dependent editing at 40% of the activity of full length ACF. Live cell FRET and immunoprecipitation assays revealed that ACF320 formed homomultimers in situ that were bridged by RNA. Our study predicted that the C to U editosome may be assembled on the mooring sequence of apoB mRNA as a dimer of ACF bound to a dimer of APOBEC-1.

Indexed as

Protein MultimerizationAnimalsApolipoproteins BCell LineEscherichia coliHeterogeneous-Nuclear RibonucleoproteinsHumansProtein Structure, TertiaryRatsRecombinant ProteinsRNARNA EditingTrypsinAPOBEC-1 complementation factor, ratApolipoproteins BHeterogeneous-Nuclear RibonucleoproteinsRecombinant ProteinsRNATrypsin

Identifiers

PMID20541536
PMCPMC2912146
OpenAlexW2097370043

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.