Evidence map›Paper›PMID 20539088›Full record

ArticleAIDS (London, England)2010

Correlates of spontaneous viral control among long-term survivors of perinatal HIV-1 infection expressing human leukocyte antigen-B57.

Yanhua Tang, Sihong Huang, Jacqueline Dunkley-Thompson, Julianne C Steel-Duncan, Elizabeth G Ryland, M Anne St John, Rohan Hazra, Celia D C Christie, Margaret E Feeney

Abstract read
In one paragraph

Article in AIDS (London, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Approach to the management of paediatric HIV spontaneous controllers.Southern African journal of infectious diseases · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 3 countries.

Yanhua TangRagon Institute of MGH, MIT, Charlestown, Massachusetts, USA.
Sihong Huang
Jacqueline Dunkley-Thompson
Julianne C Steel-Duncan
Elizabeth G Ryland
M Anne St John
Rohan Hazra
Celia D C Christie
Margaret E Feeney
University of the West Indies · JMDuke University Hospital · USHarvard University · USNational Cancer Institute · USQueen Elizabeth Hospital · BBRagon Institute of MGH, MIT and Harvard · USUniversity of San Francisco · US

Funding

The impact of CD8 T cells on viral control and evolution in HIV-infected infantsR01AI068497 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FEENEY, MARGARET E · 2007 to 2011
$2.0M
Intramural NIH HHSNIAID NIH HHS R01 AI068497NIAID NIH HHS R01-AI068497
6 · The paper itself

Abstract

objectiveWe sought to identify immunologic and virologic correlates of spontaneous viral control among long-term survivors of perinatal HIV infection expressing the protective human leukocyte antigen (HLA)-B57 allele.

designThe frequency, epitope specificity, and functional attributes of HIV-specific T cells and sequence variation within B57-restricted epitopes were compared between 'spontaneous controllers' who maintained normal CD4 percentages and viral loads less than 3000 copies/ml without antiretroviral therapy, and 'treated progressors' who had initiated HAART.

methodsRecognition of HIV optimal epitopes was assessed by interferon gamma (IFNgamma) enzyme-linked immunosorbent spot. Functional characterization of CD8 cells targeting B57 epitopes was performed by staining for cytokine production (intracellular IFNgamma, interleukin-2, tumor necrosis factor alpha) and degranulation. Sequencing of autologous RNA was performed to determine the prevalence of viral escape mutations within B57-restricted epitopes and associated compensatory mutations.

resultsHLA-B57 remained immunodominant during chronic infection in both controllers and progressors, but controllers recognized fewer epitopes and targeted epitopes within Gag and reverse transcriptase only, whereas progressors demonstrated a broader response targeting additional proteins. No individual epitope was targeted more frequently by spontaneous controllers. CD8 cytokine production patterns were heterogeneous among individuals and even among different epitopes in the same individual and did not correlate with spontaneous viral control. Extensive sequence variation within B57 epitopes was observed in both groups, but only progressors displayed additional capsid mutations that are known to offset the viral fitness cost of B57-driven immune escape.

conclusionAmong HLA-B57-positive long-term survivors, spontaneous control of viremia is not associated with a qualitatively or quantitatively superior T-cell response, but with uncompensated fitness-attenuating mutations in the viral capsid.

Indexed as

HIV-1AdolescentCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesChildEpitopes, T-LymphocyteFemaleHIV InfectionsHIV Long-Term SurvivorsHLA-B AntigensHumansImmune ToleranceInterferon-gammaMaleViremiaEpitopes, T-LymphocyteHLA-B57 antigenHLA-B AntigensInterferon-gamma

Identifiers

PMID20539088
PMCPMC2903552
OpenAlexW2128974393

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.