Evidence map›Paper›PMID 20537990›Full record

ArticleDevelopmental biology2010

Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.

Cody J Smith, Joseph D Watson, W Clay Spencer, Tim O'Brien, Byeong Cha, Adi Albeg, Millet Treinin, David M Miller

Abstract read
In one paragraph

Article in Developmental biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed, 232 citations in OpenAlex.

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  12. The PVD neuron has male-specific structure and mating function inProceedings of the National Academy of Sciences of the United States of America · 2025
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75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Cody J SmithDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37232-8240, USA.
Joseph D Watson
W Clay Spencer
Tim O'Brien
Byeong Cha
Adi Albeg
Millet Treinin
David M Miller
Vanderbilt University · USHadassah Medical Center · IL

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
TRANSGENIC MOUSE/ ES CELL SHARES RESOURCESP60DK020593 · NIDDK · VANDERBILT UNIVERSITY · PI MCGUINNESS, OWEN P · 1986 to 2011
$28.1M
Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
THREE-TIERED PREVENTION MODEL TO BETTER SERVE ALL STUDENP30HD015052 · NICHD · VANDERBILT UNIVERSITY · PI DYKENS, ELISABETH MAY · 1985 to 2014
$18.6M
MOLECULAR GENETICS OF NEURAL SPECIFICITYR01NS026115 · NINDS · VANDERBILT UNIVERSITY · PI MILLER, DAVID M · 1994 to 2010
$3.0M
Identification of transcriptional determinants of dendritic patterningR21NS066882 · NINDS · VANDERBILT UNIVERSITY · PI MILLER, DAVID M · 2009 to 2010
$417k
Neuronal gene regulation by the synaptic protein RPM-1F31NS049743 · NINDS · VANDERBILT UNIVERSITY · PI WATSON, JOSEPH D · 2004 to 2006
$77k
NCI NIH HHS P30 CA068485NCI NIH HHS P30 CA68485NEI NIH HHS P30 EY008126NEI NIH HHS P30EY08126NHLBI NIH HHS P01 HL6744NICHD NIH HHS HD15052NICHD NIH HHS P30 HD015052NIDDK NIH HHS P30 DK058404NIDDK NIH HHS P30 DK58404NIDDK NIH HHS P60 DK020593NIDDK NIH HHS P60 DK20593NINDS NIH HHS F31 NS049743NINDS NIH HHS F31 NS49743NINDS NIH HHS R01 NS026115NINDS NIH HHS R01 NS26115NINDS NIH HHS R21 NS066882NINDS NIH HHS R21 NS06882
6 · The paper itself

Abstract

Nociceptive neurons innervate the skin with complex dendritic arbors that respond to pain-evoking stimuli such as harsh mechanical force or extreme temperatures. Here we describe the structure and development of a model nociceptor, the PVD neuron of C. elegans, and identify transcription factors that control morphogenesis of the PVD dendritic arbor. The two PVD neuron cell bodies occupy positions on either the right (PVDR) or left (PVDL) sides of the animal in posterior-lateral locations. Imaging with a GFP reporter revealed a single axon projecting from the PVD soma to the ventral cord and an elaborate, highly branched arbor of dendritic processes that envelop the animal with a web-like array directly beneath the skin. Dendritic branches emerge in a step-wise fashion during larval development and may use an existing network of peripheral nerve cords as guideposts for key branching decisions. Time-lapse imaging revealed that branching is highly dynamic with active extension and withdrawal and that PVD branch overlap is prevented by a contact-dependent self-avoidance, a mechanism that is also employed by sensory neurons in other organisms. With the goal of identifying genes that regulate dendritic morphogenesis, we used the mRNA-tagging method to produce a gene expression profile of PVD during late larval development. This microarray experiment identified>2,000 genes that are 1.5X elevated relative to all larval cells. The enriched transcripts encode a wide range of proteins with potential roles in PVD function (e.g., DEG/ENaC and Trp channels) or development (e.g., UNC-5 and LIN-17/frizzled receptors). We used RNAi and genetic tests to screen 86 transcription factors from this list and identified eleven genes that specify PVD dendritic structure. These transcription factors appear to control discrete steps in PVD morphogenesis and may either promote or limit PVD branching at specific developmental stages. For example, time-lapse imaging revealed that MEC-3 (LIM homeodomain) is required for branch initiation in early larval development whereas EGL-44 (TEAD domain) prevents ectopic PVD branching in the adult. A comparison of PVD-enriched transcripts to a microarray profile of mammalian nociceptors revealed homologous genes with potentially shared nociceptive functions. We conclude that PVD neurons display striking structural, functional and molecular similarities to nociceptive neurons from more complex organisms and can thus provide a useful model system in which to identify evolutionarily conserved determinants of nociceptor fate.

Indexed as

Gene Expression ProfilingAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsDendritesMicroscopy, ConfocalMicroscopy, VideoMolecular Dynamics SimulationNeuronsNociceptorsOligonucleotide Array Sequence AnalysisRNA InterferenceTranscription FactorsCaenorhabditis elegans ProteinsTranscription Factors

Identifiers

PMID20537990
PMCPMC2919608
OpenAlexW2169188566

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.