Evidence map›Paper›PMID 20534806›Full record

ArticleJournal of clinical microbiology2010

Ancestral lineages of human enterotoxigenic Escherichia coli.

Hans Steinsland, David W Lacher, Halvor Sommerfelt, Thomas S Whittam

Registry-linked trialAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02870751 (Developing A Human Challenge Model For Evaluating Vaccines Against ST-producing Enterotoxigenic Escherichia Coli), which is not on this map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02870751 phase1unknown statusnot on this mapstarted 2016, after this paper: background citation

Developing A Human Challenge Model For Evaluating Vaccines Against ST-producing Enterotoxigenic Escherichia Coli

TypeinterventionalSponsorUniversity of BergenRan2016 to 2019Enrolled30ConditionsDiarrhea, InfantileArmsTW11681 or TW10722
3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Review
  4. EnteroaggregativeEcoSal Plus · 2025
    Review
  5. Diversity and phage sensitivity to phages of porcine enterotoxigenicApplied and environmental microbiology · 2024
    Article
  6. Optimization of EnterotoxigenicMicroorganisms · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Diarrheagenic Escherichia coli.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2016
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hans SteinslandUniversity of Bergen, Centre for International Health, P.O. Box 7804, N-5020 Bergen, Norway. hans.steinsland@bio.uib.no
David W Lacher
Halvor Sommerfelt
Thomas S Whittam

Funding

NIAID NIH HHS N01 AI030058NIAID NIH HHS N01-AI-30058
6 · The paper itself

Abstract

Enterotoxigenic Escherichia coli (ETEC) is a common cause of diarrhea among children living in and among travelers visiting developing countries. Human ETEC strains represent an epidemiologically and phenotypically diverse group of pathogens, and there is a need to identify natural groupings of these organisms that may help to explain this diversity. Here, we sought to identify most of the important human ETEC lineages that exist in the E. coli population, because strains that originate from the same lineage may also have inherited many of the same epidemiological and phenotypic traits. We performed multilocus sequence typing (MLST) on 1,019 ETEC isolates obtained from humans in different countries and analyzed the data against a backdrop of MLST data from 1,250 non-ETEC E. coli and eight ETEC isolates from pigs. A total of 42 different lineages were identified, 15 of which, representing 792 (78%) of the strains, were estimated to have emerged >900 years ago. Twenty of the lineages were represented in more than one country. There was evidence of extensive exchange of enterotoxin and colonization factor genes between different lineages. Human and porcine ETEC have probably emerged from the same ancestral ETEC lineage on at least three occasions. Our findings suggest that most ETEC strains circulating in the human population today originate from well-established, globally widespread ETEC lineages. Some of the more important lineages identified here may represent a smaller and more manageable target for the ongoing efforts to develop effective ETEC vaccines.

Indexed as

Cluster AnalysisEvolution, MolecularAdultAnimalsBacterial Typing TechniquesChildChild, PreschoolDNA, BacterialDNA FingerprintingEnterotoxigenic Escherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGene Transfer, HorizontalHumansSequence Analysis, DNASwineDNA, BacterialEscherichia coli ProteinsVirulence Factors

Identifiers

PMID20534806
PMCPMC2916599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.