Evidence map›Paper›PMID 20532958›Full record

ArticleGenetica2010

Expressional diversity of wheat nsLTP genes: evidence of subfunctionalization via cis-regulatory divergence.

Hong Wei Wang, Hyuk Jin Kwon, Won Cheol Yim, Sung Don Lim, Jun-Cheol Moon, Byung-Moo Lee, Yong Weon Seo, Wook Kim, Cheol Seong Jang

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Grass-SpecificThe Plant cell · 2020
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  5. Review
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  7. Article
  8. Evolutionary history of trihelix family and their functional diversification.DNA research : an international journal for rapid publication of reports on genes and genomes · 2014
    Article
  9. Structural genes of wheat and barley 5-methylcytosine DNA glycosylases and their potential applications for human health.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  10. Insight into the molecular evolution of non-specific lipid transfer proteins via comparative analysis between rice and sorghum.DNA research : an international journal for rapid publication of reports on genes and genomes · 2012
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Hong Wei WangDivision of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul 136-713, Korea.
Hyuk Jin Kwon
Won Cheol Yim
Sung Don Lim
Jun-Cheol Moon
Byung-Moo Lee
Yong Weon Seo
Wook Kim
Cheol Seong Jang
Dongguk University · KRKorea University · KRKangwon National University · KRNational Institute of Agricultural Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previously, the wheat non-specific lipid transfer proteins (TaLTP), members of a small multigene family, were reported to evidence a complex pattern of expression regulation. In order to assess further the expression diversity of the TaLTP genes, we have attempted to evaluate their expression profiles in responses to abiotic stresses, using semi-quantitative RT-PCR. The expression profiles generated herein revealed that the TaLTP genes in group A evidenced highly similar responses against abiotic stresses, whereas differential expression patterns among genes in each group were also observed. A total of seven promoters were fused to a GUS reporter gene and the recombinants were introduced into Arabidopsis, while three promoters evidenced non-detectible GUS activity. The promoters of TaLTP1, TaLTP7, and TaLTP10 included in group A drove strong expressions during plant development with overlapping patterns, in large part, but also exhibited distinct expression pattern, thereby suggesting subfunctionalization processing over evolutionary time. However, only trace expression in cotyledons, young emerged leaves, and epidermal cell layers of flower ovaries was driven by the promoter of TaLTP3 of group B. These results indicate that their distinct physiological functions appear to be accomplished by a subfunctionalization process involving degenerative mutations in regulatory regions.

Indexed as

Gene Expression Regulation, PlantArabidopsisBase SequenceCarrier ProteinsEvolution, MolecularGenes, PlantPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticRegulatory Sequences, Nucleic AcidReverse Transcriptase Polymerase Chain ReactionStress, PhysiologicalTriticumCarrier Proteinslipid transfer proteinPlant Proteins

Identifiers

PMID20532958
OpenAlexW1997065250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.