Evidence map›Paper›PMID 20532887›Full record

ArticleCurrent genetics2010

Transcriptional effect of a calmodulin inhibitor, W-7, on the ligninolytic enzyme genes in Phanerochaete chrysosporium.

Takaiku Sakamoto, Hironori Kitaura, Masahiko Minami, Yoichi Honda, Takashi Watanabe, Akio Ueda, Kazumi Suzuki, Toshikazu Irie

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Current genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Takaiku SakamotoThe University of Shiga Prefecture, Hikone, Japan.
Hironori Kitaura
Masahiko Minami
Yoichi Honda
Takashi Watanabe
Akio Ueda
Kazumi Suzuki
Toshikazu Irie
University of Shiga Prefecture · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated the effects of a calmodulin (CaM) inhibitor, W-7, on the expression of lignin peroxidase (LiP) and manganese peroxidase (MnP) genes in Phanerochaete chrysosporium to consider the role of cam gene, which was upregulated in parallel with the total activities of LiP and MnP in our previous transcriptomic analysis. The addition of 100 μM W-7 to the fungal cultures repressed the total activities of LiP and MnP, whereas the addition of 100 μM W-5, which is a control drug of W-7, retained approximately half of them, indicating that the effect of W-7 was attributable to CaM inhibition. Real-time reverse transcription polymerase chain reaction analysis revealed that most of lip and mnp isozyme genes predicted from whole-genome data were significantly inhibited by W-7 at the transcription level (P ≤ 0.05). These results suggest that CaM has an important role for the expression of isozyme genes of LiP and MnP at the transcription level.

Indexed as

Transcription, GeneticCalcium-Calmodulin-Dependent Protein KinasesCalmodulinDNA PrimersFungal ProteinsGene Expression Regulation, FungalGenes, FungalGenome, FungalLigninPeroxidasesPhanerochaetePolymerase Chain ReactionSignal TransductionSulfonamidesTrifluoperazineCalcium-Calmodulin-Dependent Protein KinasesCalmodulinDNA PrimersFungal ProteinsLigninlignin peroxidasemanganese peroxidasePeroxidasesSulfonamidesTrifluoperazineW 7

Identifiers

PMID20532887
OpenAlexW1983512488

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.