ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010
SNP assay to detect the 'Hyuuga' red-brown lesion resistance gene for Asian soybean rust.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 37 citations in OpenAlex.
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- RNA-Seq and Comparative Transcriptomic Analyses of Asian Soybean Rust Resistant and Susceptible Soybean Genotypes Provide Insights into Identifying Disease Resistance Genes.International journal of molecular sciences · 2023Article
- Peptide Nucleic Acid Based Molecular Authentication for Identification of Four Medicinal Paeonia Species Using Melting Array Analysis of the Internal Transcribed Spacer 2 Region.Molecules (Basel, Switzerland) · 2017Article
- Identification of a soybean rust resistance gene in PI 567104B.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- A novel Phakopsora pachyrhizi resistance allele (Rpp) contributed by PI 567068A.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- Differential expression of four soybean bZIP genes during Phakopsora pachyrhizi infection.Functional & integrative genomics · 2015Article
- Genetic analysis and molecular mapping of resistance gene to Phakopsora pachyrhizi in soybean germplasm SX6907.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Fine mapping of the Asian soybean rust resistance gene Rpp2 from soybean PI 230970.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.Nature biotechnology · 2014Article
- Expression analysis reveals a role for hydrophobic or epicuticular wax signals in pre-penetration structure formation of Phakopsora pachyrhizi.Plant signaling & behavior · 2013Article
- Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing.BMC genomics · 2013Article
- Genetic mapping of three quantitative trait loci for soybean aphid resistance in PI 567324.Heredity · 2013Article
- Molecular mapping of soybean rust resistance in soybean accession PI 561356 and SNP haplotype analysis of the Rpp1 region in diverse germplasm.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- High-resolution melting analysis for SNP genotyping and mapping in tetraploid alfalfa (Medicago sativa L.).Molecular breeding : new strategies in plant improvement · 2012Article
- Loss of abaxial leaf epicuticular wax in Medicago truncatula irg1/palm1 mutants results in reduced spore differentiation of anthracnose and nonhost rust pathogens.The Plant cell · 2012Article
- A locked nucleic acid clamp-mediated PCR assay for detection of a p53 codon 249 hotspot mutation in urine.The Journal of molecular diagnostics : JMD · 2011Article
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Authors and funding
4 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Asian soybean rust (ASR), caused by Phakopsora pachyrhizi Syd., has the potential to become a serious threat to soybean, Glycine max L. Merr., production in the USA. A novel rust resistance gene, Rpp?(Hyuuga), from the Japanese soybean cultivar Hyuuga has been identified and mapped to soybean chromosome 6 (Gm06). Our objectives were to fine-map the Rpp?(Hyuuga) gene and develop a high-throughput single nucleotide polymorphism (SNP) assay to detect this ASR resistance gene. The integration of recombination events from two different soybean populations and the ASR reaction data indicates that the Rpp?(Hyuuga) locus is located in a region of approximately 371 kb between STS70887 and STS70923 on chromosome Gm06. A set of 32 ancestral genotypes which is predicted to contain 95% of the alleles present in current elite North American breeding populations and the sources of the previously reported ASR resistance genes (Rpp1, Rpp2, Rpp3, Rpp4, Rpp5, and rpp5) were genotyped with five SNP markers. We developed a SimpleProbe assay based on melting curve analysis for SNP06-44058 which is tighly linked to the Rpp?(Hyuuga) gene. This SNP assay can differentiate plants/lines that are homozygous/homogeneous or heterozygous/heterogeneous for the resistant and susceptible alleles at the Rpp?(Hyuuga) locus.
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