Evidence map›Paper›PMID 20532374›Full record

ArticleChemical communications (Cambridge, England)2010

Blunt-ended DNA stacking interactions in a 3-helix motif.

Risheng Wang, Akinori Kuzuya, Wenyan Liu, Nadrian C Seeman

Abstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Tuning the stability of DNA tetrahedra with base-stacking interactions.bioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Constructing Large 2D Lattices Out of DNA-Tiles.Molecules (Basel, Switzerland) · 2021
    Review
  8. Review
  9. Article
  10. Reversible Covalent Stabilization of Stacking Contacts in DNA Assemblies.Angewandte Chemie (International ed. in English) · 2019
    Article
  11. Article
  12. Molecular ping-pong Game of Life on a two-dimensional DNA origami array.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2015
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Risheng WangDepartment of Chemistry, New York University, New York, NY 10003, USA.
Akinori Kuzuya
Wenyan Liu
Nadrian C Seeman

Funding

Physical Chemistry of Recombinational IntermediatesR37GM029554 · NIGMS · NEW YORK UNIVERSITY · PI SEEMAN, NADRIAN C. · 2005 to 2012
$2.7M
NIGMS NIH HHS GM-29544NIGMS NIH HHS R37 GM029554
6 · The paper itself

Abstract

We demonstrate that intermolecular stacking is capable of forming one-dimensional arrays of a blunt-ended 3-helix DNA motif. The array can be visualized in the atomic force microscopy through conjugated streptavidin nanoparticles. We estimate the strength of the triple stacking interaction to be -8.6 kcal mol(-1).

Indexed as

Base SequenceDNAMicroscopy, Atomic ForceNucleic Acid ConformationThermodynamicsDNA

Identifiers

PMID20532374
PMCPMC3454654

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.