Evidence map›Paper›PMID 20526757›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.).

Y P Khedikar, M V C Gowda, C Sarvamangala, K V Patgar, H D Upadhyaya, R K Varshney

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
20.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 200 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Genome-wide association mapping for LLS resistance in a MAGIC population of groundnut (Arachis hypogaea L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  9. Review
  10. The genusFrontiers in plant science · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Mapping QTLs for3 Biotech · 2021
    Article
  17. Genetic diversity and population structure of groundnut (Genetic resources and crop evolution · 2021
    Article
  18. Review
  19. Article
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Y P KhedikarUniversity of Agricultural Sciences (UAS), Krishinagar, Dharwad, 580 005, Karnataka, India.
M V C Gowda
C Sarvamangala
K V Patgar
H D Upadhyaya
R K Varshney
University of Agricultural Sciences, Dharwad · INInternational Crops Research Institute for the Semi-Arid Tropics · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Late leaf spot (LLS) and rust are two major foliar diseases of groundnut (Arachis hypogaea L.) that often occur together leading to 50-70% yield loss in the crop. A total of 268 recombinant inbred lines of a mapping population TAG 24 x GPBD 4 segregating for LLS and rust were used to undertake quantitative trait locus (QTL) analysis. Phenotyping of the population was carried out under artificial disease epiphytotics. Positive correlations between different stages, high to very high heritability and independent nature of inheritance between both the diseases were observed. Parental genotypes were screened with 1,089 simple sequence repeat (SSR) markers, of which 67 (6.15%) were found polymorphic. Segregation data obtained for these markers facilitated development of partial linkage map (14 linkage groups) with 56 SSR loci. Composite interval mapping (CIM) undertaken on genotyping and phenotyping data yielded 11 QTLs for LLS (explaining 1.70-6.50% phenotypic variation) in three environments and 12 QTLs for rust (explaining 1.70-55.20% phenotypic variation). Interestingly a major QTL associated with rust (QTL(rust)01), contributing 6.90-55.20% variation, was identified by both CIM and single marker analysis (SMA). A candidate SSR marker (IPAHM 103) linked with this QTL was validated using a wide range of resistant/susceptible breeding lines as well as progeny lines of another mapping population (TG 26 x GPBD 4). Therefore, this marker should be useful for introgressing the major QTL for rust in desired lines/varieties of groundnut through marker-assisted backcrossing.

Indexed as

DNA ShufflingArachisBasidiomycotaChromosome MappingCrosses, GeneticGenetic MarkersImmunity, InnateInbreedingPhenotypePlant DiseasesPlant LeavesQuantitative Trait LociRecombination, GeneticReproducibility of ResultsTetraploidyGenetic Markers

Identifiers

PMID20526757
PMCPMC2921499
OpenAlexW2132139074

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.