Evidence map›Paper›PMID 20526349›Full record

ArticleNature medicine2010

Rearrangements of the RAF kinase pathway in prostate cancer, gastric cancer and melanoma.

Nallasivam Palanisamy, Bushra Ateeq, Shanker Kalyana-Sundaram, Dorothee Pflueger, Kalpana Ramnarayanan, Sunita Shankar, Bo Han, Qi Cao, Xuhong Cao, Khalid Suleman and 21 more

Abstract read
In one paragraph

Article in Nature medicine, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 262 papers.

0numbers the graph read from it
0cells of the map it votes in
262citing papers in PubMed
23.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

262 citing papers in PubMed, 468 citations in OpenAlex.

  1. Article
  2. Gene fusions in melanocytic lesions: an updated comprehensive review.Journal of pathology and translational medicine · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Prevalence ofBiomedicines · 2023
    Article
  10. [Research Progress of BRAF Fusion in Non-small Cell Lung Cancer].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2023
    Review
  11. Unique Spectrum of Activating BRAF Alterations in Prostate Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  12. Article
  13. Article
  14. MEK inhibitor sensitivity in BRAF fusion-driven prostate cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Article

202 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors at 7 institutions in 4 countries.

Nallasivam PalanisamyMichigan Center for Translational Pathology, University of Michigan, Ann Arbor, Michigan, USA.
Bushra Ateeq
Shanker Kalyana-Sundaram
Dorothee Pflueger
Kalpana Ramnarayanan
Sunita Shankar
Bo Han
Qi Cao
Xuhong Cao
Khalid Suleman
Chandan Kumar-Sinha
Saravana M Dhanasekaran
Ying-bei Chen
Raquel Esgueva
Samprit Banerjee
Christopher J LaFargue
Javed Siddiqui
Francesca Demichelis
Peter Moeller
Tarek A Bismar
Rainer Kuefer
Douglas R Fullen
Timothy M Johnson
Joel K Greenson
Thomas J Giordano
Patrick Tan
Scott A Tomlins
Sooryanarayana Varambally
Mark A Rubin
Christopher A Maher
Arul M Chinnaiyan
University of Michigan–Ann Arbor · USMichigan Center for Translational Pathology · USCornell University · USUniversity Hospital Ulm · DEHoward Hughes Medical Institute · USNational University of Singapore · SGUniversity of Calgary · CA

Funding

VACCINIA PSA FOR ANDROGEN-MODULATED POST-SURGICAL RECURRENCE OF PROSTATE CANCERP50CA069568 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1995 to 2013
$31.3M
Nation Center- Integrative Biomedical Informatics(RMI)U54DA021519 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2005 to 2010
$21.3M
Epitomic Biomarkers of Prostate CancerU01CA111275 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M, RUBIN, MARK A. · 2004 to 2015
$6.8M
Towards Understanding Prostate Cancer HeterogeneityR01CA125612 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI RUBIN, MARK A. · 2007 to 2017
$3.4M
Molecuar Sub-typing of Prostate Cancer Based on Recurrent Gene FusionsR01CA132874 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M · 2009 to 2013
$1.2M
CIHRHoward Hughes Medical InstituteNCI NIH HHS P50 CA069568NCI NIH HHS P50CA69568NCI NIH HHS R01 CA125612NCI NIH HHS R01 CA125612-01NCI NIH HHS R01 CA132874NCI NIH HHS R01CA132874NCI NIH HHS U01 CA111275NIDA NIH HHS U54 DA021519NIDA NIH HHS U54 DA21519-01A1
6 · The paper itself

Abstract

Although recurrent gene fusions involving erythroblastosis virus E26 transformation-specific (ETS) family transcription factors are common in prostate cancer, their products are considered 'undruggable' by conventional approaches. Recently, rare targetable gene fusions involving the anaplastic lymphoma receptor tyrosine kinase (ALK) gene, have been identified in 1-5% of lung cancers, suggesting that similar rare gene fusions may occur in other common epithelial cancers, including prostate cancer. Here we used paired-end transcriptome sequencing to screen ETS rearrangement-negative prostate cancers for targetable gene fusions and identified the SLC45A3-BRAF (solute carrier family 45, member 3-v-raf murine sarcoma viral oncogene homolog B1) and ESRP1-RAF1 (epithelial splicing regulatory protein-1-v-raf-1 murine leukemia viral oncogene homolog-1) gene fusions. Expression of SLC45A3-BRAF or ESRP1-RAF1 in prostate cells induced a neoplastic phenotype that was sensitive to RAF and mitogen-activated protein kinase kinase (MAP2K1) inhibitors. Screening a large cohort of patients, we found that, although rare, recurrent rearrangements in the RAF pathway tend to occur in advanced prostate cancers, gastric cancers and melanoma. Taken together, our results emphasize the key role of RAF family gene rearrangements in cancer, suggest that RAF and MEK inhibitors may be useful in a subset of gene fusion-harboring solid tumors and demonstrate that sequencing of tumor transcriptomes and genomes may lead to the identification of rare targetable fusions across cancer types.

Indexed as

Translocation, GeneticHumansMaleMelanomaMembrane Transport ProteinsMonosaccharide Transport ProteinsOncogene Proteins, FusionProstatic NeoplasmsProto-Oncogene Proteins B-rafProto-Oncogene Proteins c-rafRNA-Binding ProteinsSignal TransductionStomach NeoplasmsESRP1 protein, humanMembrane Transport ProteinsMonosaccharide Transport ProteinsOncogene Proteins, FusionProto-Oncogene Proteins B-rafProto-Oncogene Proteins c-rafRNA-Binding ProteinsSLC45a3 protein, human

Identifiers

PMID20526349
PMCPMC2903732
OpenAlexW2029575024

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.