Evidence map›Paper›PMID 20526338›Full record

ArticleNature genetics2010

Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in response to agonists.

Andrew D Johnson, Lisa R Yanek, Ming-Huei Chen, Nauder Faraday, Martin G Larson, Geoffrey Tofler, Shiow J Lin, Aldi T Kraja, Michael A Province, Qiong Yang and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 144 papers, 10 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
144citing papers in PubMed, 10 pooled it
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

144 citing papers in PubMed, 10 syntheses or guidelines pooled it, 268 citations in OpenAlex.

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  13. GP6 Haplotype of Missense Variants is Associated with Sticky Platelet Syndrome Manifested by Fetal Loss.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis · 2018
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84 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 2 countries.

Andrew D JohnsonNational Heart, Lung, and Blood Institute's The Framingham Heart Study, Framingham, Massachusetts, USA. johnsonad2@nhlbi.nih.gov
Lisa R Yanek
Ming-Huei Chen
Nauder Faraday
Martin G Larson
Geoffrey Tofler
Shiow J Lin
Aldi T Kraja
Michael A Province
Qiong Yang
Diane M Becker
Christopher J O'Donnell
Lewis C Becker
Washington University in St. Louis · USFramingham Heart Study · USJohns Hopkins Medicine · USJohns Hopkins University · USNational Heart Lung and Blood Institute · USBoston University · USUniversity of Sydney · AU

Funding

ZINC AND CA EDTA THERAPY OF PLUMBISMM01RR000052 · NCRR · JOHNS HOPKINS UNIVERSITY · PI MARSH, LAURA · 1985 to 2007
$37.3M
Genotypic Determinants of Aspirin Response in High Risk FamiliesU01HL072518 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI BECKER, LEWIS C · 2002 to 2008
$12.8M
Genomic Epidemiology of Cardiovascular DiseaseZIAHL006002 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI O'DONNELL, CHRISTOPHER · 2009 to 2015
$8.0M
Genome-Wide Association of Platelet PhenotypesR01HL087698 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI BECKER, LEWIS C · 2007 to 2009
$3.8M
SLEEP AND ENTRAINMENT OF SCN FUNCTIONR01HL064278 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI STROHL, KINGMAN PERKINS · 1999 to 2002
$871k
NOVEL HEMOSTATIC CARDIAC RISK FACTORS IN FRAMINGHAMR01HL048157 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI MITTLEMAN, MURRAY A · 1994 to 1997
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THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
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TRANSPLANT OF ISLETS IN LIVER DISEASE &DM REQUIRING LIVER TRANSPLANTM01RR005280 · NCRR · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · 1989 to 1996
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Intramural NIH HHS Z99 HL999999NCRR NIH HHS M01 RR000052NCRR NIH HHS M01-RR000052NCRR NIH HHS M01 RR005280NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N02 HL064278NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01 HL048157NHLBI NIH HHS R01 HL087698NHLBI NIH HHS U01 HL072518NHLBI NIH HHS U01 HL72518
6 · The paper itself

Abstract

Platelet function mediates both beneficial and harmful effects on human health, but few genes are known to contribute to variability in this process. We tested association of 2.5 million SNPs with platelet aggregation responses to three agonists (ADP, epinephrine and collagen) in two cohorts of European ancestry (N<or=2,753 in the Framingham Heart Study, N<or=1,238 in the Genetic Study of Atherosclerosis Risk). We identified associations of seven loci with platelet aggregation near or within GP6 (P=4.6x10(-13)), PEAR1 (P=3.4x10(-12)), ADRA2A (P=3.3x10(-11)), PIK3CG (P=3.1x10(-9)), JMJD1C (P=1.6x10(-8)), MRVI1 (P=2.0x10(-8)) and SHH (P=4.5x10(-8)). Six of these loci replicated at P<0.05 in an additional African-American cohort (N<or=840 in the Genetic Study of Atherosclerosis Risk). These results provide insights into platelet aggregation pathways and may suggest new antiplatelet therapeutic targets.

Indexed as

Genome-Wide Association StudyMeta-Analysis as TopicPolymorphism, Single NucleotideAdenosine DiphosphateAdrenergic alpha-AgonistsCohort StudiesCollagenEpinephrineFemaleGenotypeHumansMalePhenotypePlatelet AggregationProspective StudiesAdenosine DiphosphateAdrenergic alpha-AgonistsCollagenEpinephrine

Identifiers

PMID20526338
PMCPMC3057573
OpenAlexW2049884419

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.