Evidence map›Paper›PMID 20525824›Full record

ArticleJournal of bacteriology2010

CcpA mediates proline auxotrophy and is required for Staphylococcus aureus pathogenesis.

Chunling Li, Fei Sun, Hoonsik Cho, Vamshi Yelavarthi, Changmo Sohn, Chuan He, Olaf Schneewind, Taeok Bae

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Review
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  6. Review
  7. Article
  8. Article
  9. ThemBio · 2024
    Article
  10. GlutamateJournal of bacteriology · 2024
    Article
  11. Pathogens (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. StaphylococcalInternational journal of molecular sciences · 2022
    Article
  19. Adaptive Metabolism ofJournal of proteome research · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Chunling LiIndiana University School of Medicine-Northwest, Gary, Indiana 46408, USA.
Fei Sun
Hoonsik Cho
Vamshi Yelavarthi
Changmo Sohn
Chuan He
Olaf Schneewind
Taeok Bae
Indiana University Northwest · USUniversity of Chicago · USIndiana University School of Medicine

Funding

Surface Proteins of Gram-Positive BacteriaR01AI038897 · NIAID · UNIVERSITY OF CHICAGO · PI MISSIAKAS, DOMINIQUE M. · 1996 to 2024
$8.9M
Tuning Virulence Determinants in Staphylococcus aureusR01AI074658 · NIAID · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2007 to 2016
$3.8M
Prophage contribution to the virulence of Staphylococcus aureusR01AI077564 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI BAE, TAEOK · 2009 to 2013
$1.5M
NIAID NIH HHS AI074658NIAID NIH HHS AI077564NIAID NIH HHS AI38897NIAID NIH HHS R01 AI038897NIAID NIH HHS R01 AI074658NIAID NIH HHS R01 AI077564
6 · The paper itself

Abstract

Human clinical isolates of Staphylococcus aureus, for example, strains Newman and N315, cannot grow in the absence of proline, albeit their sequenced genomes harbor genes for two redundant proline synthesis pathways. We show here that under selective pressure, S. aureus Newman generates proline-prototrophic variants at a frequency of 3 x 10(-6), introducing frameshift and missense mutations in ccpA or IS1811 insertions in ptsH, two regulatory genes that carry out carbon catabolite repression (CCR) in staphylococci and other Gram-positive bacteria. S. aureus Newman variants with mutations in rocF (arginase), rocD (ornithine aminotransferase), and proC (Delta(1)-pyrroline 5-carboxylate [P5C] reductase) are unable to generate proline-prototrophic variants, whereas a variant with a mutation in ocd (ornithine cyclodeaminase) is unaffected. Transposon insertion in ccpA also restored proline prototrophy. CcpA was shown to repress transcription of rocF and rocD, encoding the first two enzymes, but not of proC, encoding the third and final enzyme in the P5C reductase pathway. CcpA bound to the upstream regions of rocF and rocD but not to that of proC. CcpA's binding to the upstream regions was greatly enhanced by phosphorylated HPr. The CCR-mediated proline auxotrophy was lifted when nonpreferred carbohydrates were used as the sole carbon source. The ccpA mutant displayed reduced staphylococcal load and replication in a murine model of staphylococcal abscess formation, indicating that carbon catabolite repression presents an important pathogenesis strategy of S. aureus infections.

Indexed as

AbscessAmino Acid SequenceAmmonia-LyasesAnimalsBacterial ProteinsBase SequenceGene Expression Regulation, BacterialMiceMice, Inbred BALB CMolecular Sequence DataMutationPhosphoenolpyruvate Sugar Phosphotransferase SystemProlineRepressor ProteinsStaphylococcal InfectionsStaphylococcus aureusAmmonia-LyasesBacterial Proteinscatabolite control proteins, bacteriaornithine cyclodeaminasephosphocarrier protein HPrPhosphoenolpyruvate Sugar Phosphotransferase SystemProlineRepressor Proteins

Identifiers

PMID20525824
PMCPMC2916365
OpenAlexW2120985295

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.