Evidence map›Paper›PMID 20525386›Full record

ArticleBMC cancer2010

Fractal dimension of chromatin is an independent prognostic factor for survival in melanoma.

Valcinir Bedin, Randall L Adam, Bianca Cs de Sá, Gilles Landman, Konradin Metze

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. NScientific reports · 2026
    Article
  3. Review
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  5. Review
  6. The Fractal Viewpoint of Tumors and Nanoparticles.Current medicinal chemistry · 2023
    Review
  7. Article
  8. Article
  9. Observational
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  12. Fractal anatomy of the hippocampal formation.Surgical and radiologic anatomy : SRA · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Measuring the Autocorrelation Function of Nanoscale Three-Dimensional Density Distribution in Individual Cells Using Scanning Transmission Electron Microscopy, Atomic Force Microscopy, and a New Deconvolution Algorithm.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2017
    Article
  17. Article
  18. Label-free imaging of the native, living cellular nanoarchitecture using partial-wave spectroscopic microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Valcinir BedinDepartment of Pathology, Faculty of Medical Sciences, University of Campinas, Campinas, SP, Brazil. drbedin@uol.com.br
Randall L Adam
Bianca Cs de Sá
Gilles Landman
Konradin Metze
Universidade Estadual de Campinas (UNICAMP) · BRAC Camargo Hospital · BRHospital São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrognostic factors in malignant melanoma are currently based on clinical data and morphologic examination. Other prognostic features, however, which are not yet used in daily practice, might add important information and thus improve prognosis, treatment, and survival. Therefore a search for new markers is desirable. Previous studies have demonstrated that fractal characteristics of nuclear chromatin are of prognostic importance in neoplasias. We have therefore investigated whether the fractal dimension of nuclear chromatin measured in routine histological preparations of malignant melanomas could be a prognostic factor for survival.

methodsWe examined 71 primary superficial spreading cutaneous melanoma specimens (thickness > or = 1 mm) from patients with a minimum follow up of 5 years. Nuclear area, form factor and fractal dimension of chromatin texture were obtained from digitalized images of hematoxylin-eosin stained tissue micro array sections. Clark's level, tumor thickness and mitotic rate were also determined.

resultsThe median follow-up was 104 months. Tumor thickness, Clark's level, mitotic rate, nuclear area and fractal dimension were significant risk factors in univariate Cox regressions. In the multivariate Cox regression, stratified for the presence or absence of metastases at diagnosis, only the Clark level and fractal dimension of the nuclear chromatin were included as independent prognostic factors in the final regression model.

conclusionIn general, a more aggressive behaviour is usually found in genetically unstable neoplasias with a higher number of genetic or epigenetic changes, which on the other hand, provoke a more complex chromatin rearrangement. The increased nuclear fractal dimension found in the more aggressive melanomas is the mathematical equivalent of a higher complexity of the chromatin architecture. So, there is strong evidence that the fractal dimension of the nuclear chromatin texture is a new and promising variable in prognostic models of malignant melanomas.

Indexed as

Chromatin Assembly and DisassemblyFractalsImage Processing, Computer-AssistedBiomarkers, TumorCell Nucleus SizeChromatinColoring AgentsEosine Yellowish-(YS)FemaleHematoxylinHumansKaplan-Meier EstimateMaleMelanomaMitotic IndexPredictive Value of TestsBiomarkers, TumorChromatinColoring AgentsEosine Yellowish-(YS)Hematoxylin

Identifiers

PMID20525386
PMCPMC2902442
OpenAlexW2170170186

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.