Evidence map›Paper›PMID 20525335›Full record

ArticleBMC microbiology2010

Identification of a novel anti-sigmaE factor in Neisseria meningitidis.

Carla Th P Hopman, Dave Speijer, Arie van der Ende, Yvonne Pannekoek

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. mBio · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Carla Th P HopmanAcademic Medical Center, Center for Infection and Immunity Amsterdam (CINIMA), Department of Medical Microbiology, Amsterdam, the Netherlands.
Dave Speijer
Arie van der Ende
Yvonne Pannekoek
Academic Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFine tuning expression of genes is a prerequisite for the strictly human pathogen Neisseria meningitidis to survive hostile growth conditions and establish disease. Many bacterial species respond to stress by using alternative sigma factors which, in complex with RNA polymerase holoenzyme, recognize specific promoter determinants. sigma(E), encoded by rpoE (NMB2144) in meningococci, is known to be essential in mounting responses to environmental challenges in many pathogens. Here we identified genes belonging to the sigma(E) regulon of meningococci.

resultsWe show that meningococcal sigma(E) is part of the polycistronic operon NMB2140-NMB2145 and autoregulated. In addition we demonstrate that sigma(E) controls expression of methionine sulfoxide reductase (MsrA/MsrB). Moreover, we provide evidence that the activity of sigma(E) is under control of NMB2145, directly downstream of rpoE. The protein encoded by NMB2145 is structurally related to anti-sigma domain (ASD) proteins and characterized by a zinc containing anti-sigma factor (ZAS) motif, a hall mark of a specific class of Zn(2+)-binding ASD proteins acting as anti-sigma factors. We demonstrate that Cys residues in ZAS, as well as the Cys residue on position 4, are essential for anti-sigma(E) activity of NMB2145, as found for a minority of members of the ZAS family that are predicted to act in the cytoplasm and responding to oxidative stimuli. However, exposure of cells to oxidative stimuli did not result in altered expression of sigma(E).

conclusionsTogether, our results demonstrate that meningococci express a functional transcriptionally autoregulated sigma(E) factor, the activity of which is controlled by a novel meningococcal anti-sigma factor belonging to the ZAS family.

Indexed as

Amino Acid SequenceGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicMethionine Sulfoxide ReductasesMolecular Sequence DataMultigene FamilyNeisseria meningitidisSigma FactorTranscription, Geneticmethionine sulfoxide reductaseMethionine Sulfoxide ReductasesSigma Factorsporulation-specific sigma factors

Identifiers

PMID20525335
PMCPMC2893595
OpenAlexW2009138411

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.