Evidence map›Paper›PMID 20522714›Full record

ArticleBlood2010

SATB1 dictates expression of multiple genes including IL-5 involved in human T helper cell differentiation.

Helena Ahlfors, Amita Limaye, Laura L Elo, Soile Tuomela, Mithila Burute, Kamal Vishnu P Gottimukkala, Dimple Notani, Omid Rasool, Sanjeev Galande, Riitta Lahesmaa

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
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  8. Long noncoding RNA LIRIL2R modulates FOXP3 levels and suppressive function of human CD4Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Review
  10. Article
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  14. Identification of the novel FOXP3-dependent TFrontiers in immunology · 2023
    Article
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  16. Article
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Helena AhlforsTurku Centre for Biotechnology, University of Turku and Abo Akademi University, Finland.
Amita Limaye
Laura L Elo
Soile Tuomela
Mithila Burute
Kamal Vishnu P Gottimukkala
Dimple Notani
Omid Rasool
Sanjeev Galande
Riitta Lahesmaa
National Centre for Cell Science · INTurku Centre for Biotechnology · FIUniversity of Turku · FIÅbo Akademi University · FIIndian Institute of Science Education and Research Pune · IN

Funding

Wellcome Trust
6 · The paper itself

Abstract

Special AT-rich binding protein 1 (SATB1) is a global chromatin organizer and a transcription factor regulated by interleukin-4 (IL-4) during the early T helper 2 (Th2) cell differentiation. Here we show that SATB1 controls multiple IL-4 target genes involved in human Th cell polarization or function. Among the genes regulated by SATB1 is that encoding the cytokine IL-5, which is predominantly produced by Th2 cells and plays a key role in the development of eosinophilia in asthma. We demonstrate that, during the early Th2 cell differentiation, IL-5 expression is repressed through direct binding of SATB1 to the IL-5 promoter. Furthermore, SATB1 knockdown-induced up-regulation of IL-5 is partly counteracted by down-regulating GATA3 expression using RNAi in polarizing Th2 cells. Our results suggest that a competitive mechanism involving SATB1 and GATA3 regulates IL-5 transcription, and provide new mechanistic insights into the stringent regulation of IL-5 expression during human Th2 cell differentiation.

Indexed as

Cell DifferentiationCell ProliferationBiomarkersBlotting, WesternCD4-Positive T-LymphocytesChromatin ImmunoprecipitationElectrophoretic Mobility Shift AssayGATA3 Transcription FactorGene Expression ProfilingHumansInfant, NewbornInterleukin-5LuciferasesMatrix Attachment Region Binding ProteinsOligonucleotide Array Sequence AnalysisPromoter Regions, GeneticBiomarkersGATA3 Transcription FactorIL5 protein, humanInterleukin-5LuciferasesMatrix Attachment Region Binding ProteinsRNA, MessengerRNA, Small InterferingSATB1 protein, human

Identifiers

PMID20522714
PMCPMC2938835
OpenAlexW2087984111

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.