Evidence map›Paper›PMID 20521848›Full record

ReviewJournal of proteome research2010

Proteomic identification of carbonylated proteins and their oxidation sites.

Ashraf G Madian, Fred E Regnier

Abstract readReview
In one paragraph

Review in Journal of proteome research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Chemical Carbonylation of Arginine in Peptides and Proteins.Journal of the American Chemical Society · 2025
    Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Iron Availability Influences Protein Carbonylation inInternational journal of molecular sciences · 2023
    Article
  18. Mass spectrometry-based retina proteomics.Mass spectrometry reviews · 2023
    Review
  19. Article
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ashraf G MadianChemistry Department, Purdue University, West Lafayette, Indiana 47907, USA.
Fred E Regnier

Funding

APT: the Analytical Proteomics TeamU24CA126480 · NCI · PURDUE UNIVERSITY · PI REGNIER, FRED E · 2006 to 2010
$6.4M
MITOCHONDRIAL PROTEOMICS OF AGINGR01AG025362 · NIA · PURDUE UNIVERSITY WEST LAFAYETTE · PI REGNIER, FRED E · 2004 to 2008
$1.2M
NCI NIH HHS 1U24CA126480-01NCI NIH HHS U24 CA126480NIA NIH HHS 5R01AG025362-02NIA NIH HHS R01 AG025362
6 · The paper itself

Abstract

Excessive oxidative stress leaves a protein carbonylation fingerprint in biological systems. Carbonylation is an irreversible post-translational modification (PTM) that often leads to the loss of protein function and can be a component of multiple diseases. Protein carbonyl groups can be generated directly (by amino acids oxidation and the alpha-amidation pathway) or indirectly by forming adducts with lipid peroxidation products or glycation and advanced glycation end-products. Studies of oxidative stress are complicated by the low concentration of oxidation products and a wide array of routes by which proteins are carbonylated. The development of new selection and enrichment techniques coupled with advances in mass spectrometry are allowing the identification of hundreds of new carbonylated protein products from a broad range of proteins located at many sites in biological systems. The focus of this review is on the use of proteomics tools and methods to identify oxidized proteins along with specific sites of oxidative damage and the consequences of protein oxidation.

Indexed as

Models, MolecularBiotinElectrophoresis, Gel, Two-DimensionalHydrazinesMolecular StructureOxidation-ReductionOxidative StressProtein CarbonylationProteinsProteomicsReactive Oxygen SpeciesTandem Mass SpectrometryBiotinbiotin hydrazidedinitrophenylhydrazineHydrazinesProteinsReactive Oxygen Species

Identifiers

PMID20521848
PMCPMC3214645

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.