Evidence map›Paper›PMID 20520587›Full record

ArticlePsychiatric genetics2010

Genome-wide association study identifies genes that may contribute to risk for developing heroin addiction.

David A Nielsen, Fei Ji, Vadim Yuferov, Ann Ho, Chunsheng He, Jurg Ott, Mary Jeanne Kreek

Abstract read
In one paragraph

Article in Psychiatric genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 3 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 3 syntheses or guidelines pooled it, 67 citations in OpenAlex.

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  5. An intronic variant in OPRD1 predicts treatment outcome for opioid dependence in African-Americans.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

David A NielsenLaboratory of the Biology of Addictive Diseases, The Rockefeller University, New York 10065, USA.
Fei Ji
Vadim Yuferov
Ann Ho
Chunsheng He
Jurg Ott
Mary Jeanne Kreek
Rockefeller University · USBeijing Institute of Genomics · CN

Funding

TRANSFORMING TRANSLATIONAL SCIENCE AND EDUCATION TO BENEFIT HUMAN HEALTHUL1RR024143 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 2006 to 2011
$49.1M
ADDICTIONS: GENOTYPES, POLYMOPHISMS, AND FUNCTIONR01DA012848 · NIDA · ROCKEFELLER UNIVERSITY · PI KREEK, MARY J · 1999 to 2003
$4.5M
Addictive Drugs-Pharmacology &PhysiologyK05DA000049 · NIDA · ROCKEFELLER UNIVERSITY · PI KREEK, MARY J · 1985 to 2007
$1.0M
NCRR NIH HHS UL1 RR024143NCRR NIH HHS UL1RR024143NIDA NIH HHS K05 DA000049NIDA NIH HHS K05-DA00049NIDA NIH HHS R01 DA012848NIDA NIH HHS R01-DA12848PHS HHS R01-44292
6 · The paper itself

Abstract

objectivesWe have used genome-wide association studies to identify variants that are associated with vulnerability to develop heroin addiction.

methodsDNA from 325 methadone stabilized, former severe heroin addicts and 250 control individuals were pooled by ethnicity (Caucasian and African-American) and analyzed using the Affymetrix GeneChip Mapping 100 K Set. Genome-wide association tests were conducted.

resultsThe strongest association with vulnerability to develop heroin addiction, with experiment-wise significance (P=0.035), was found in Caucasians with the variant rs10494334, a variant in an unannotated region of the genome (1q23.3). In African Americans, the variant most significantly associated with the heroin addiction vulnerability was rs950302, found in the cytosolic dual specificity phosphatase 27 gene DUSP27 (point-wise P=0.0079). Furthermore, analysis of the top 500 variants with the most significant associations (point-wise P< or =0.0036) in Caucasians showed that three of these variants are clustered in the regulating synaptic membrane exocytosis protein 2 gene RIMS2. Of the top 500 variants in African-Americans (point-wise P< or =0.0238), three variants are in the cardiomyopathy associated 3 gene CMYA3.

conclusionThis study identifies new genes and variants that may increase an individual's vulnerability to develop heroin addiction.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyCase-Control StudiesChromosome MappingHeroin DependenceHumansMethadoneOligonucleotide Array Sequence AnalysisPhosphoprotein PhosphatasesMethadonePhosphoprotein PhosphatasesSTYXL2 protein, human

Identifiers

PMID20520587
PMCPMC3832188
OpenAlexW1993030223

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.