Evidence map›Paper›PMID 20519410›Full record

ArticleRNA (New York, N.Y.)2010

Fragile X protein family member FXR1P is regulated by microRNAs.

Anne Cheever, Ernest Blackwell, Stephanie Ceman

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

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  16. FXR1P but not FMRP regulates the levels of mammalian brain-specific microRNA-9 and microRNA-124.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Anne CheeverDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL 61801, USA.
Ernest Blackwell
Stephanie Ceman
University of Illinois Urbana-Champaign · US

Funding

DEVELOPMENT PSYCHOBIOLOGY AND NEUROBIOLOGYT32HD007333 · NICHD · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI JURASKA, JANICE M · 1987 to 2011
$3.0M
NICHD NIH HHS 2T32HD007333-21NICHD NIH HHS T32 HD007333
6 · The paper itself

Abstract

FXR1P is one of two autosomal paralogs of the fragile X mental retardation protein FMRP. The absence of FMRP causes fragile X syndrome, the leading cause of hereditary mental retardation. FXR1P plays an important role in normal muscle development and has been implicated in facioscapulohumeral muscular dystrophy (FSHD). Its absence also causes cardiac abnormalities in both mice and zebrafish. To examine miRNA-mediated regulation of FMRP and FXR1P, we studied their expression in a conditional Dicer knockdown cell line, DT40. We found that FXR1P, but not FMRP, is significantly increased upon Dicer knockdown and the consequent reduction of miRNAs, suggesting that FXR1P is regulated by miRNAs while FMRP is not in DT40 cells. Expression of a luciferase reporter bearing the 3' untranslated region (3'UTR) of FXR1 was significantly increased in the absence of miRNAs, confirming miRNA-mediated regulation of FXR1P, while a luciferase reporter bearing the FMR1 3'UTR was not. We identified one of the regulatory regions in the 3'UTR of FXR1 by removing a conserved, 8-nucleotide miRNA seed sequence common to miRNAs 25, 32, 92, 363, and 367 and demonstrated loss of miRNA-mediated suppression. Treatment with specific miRNA hairpin inhibitors to each of the miRNAs in the seed sequence showed that miRs 92b, 363, and 367 regulated FXR1P expression. Accordingly, overexpression of the miRNA 367 mimic significantly decreased endogenous FXR1P expression in human cell lines HEK-293T and HeLa. We report for the first time that FXR1P is regulated through miRNA binding, with one site being the miR-25/32/92/363/367 seed sequence.

Indexed as

AnimalsBase SequenceCell LineDEAD-box RNA HelicasesFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHeLa CellsHumansIntellectual DisabilityMiceMicroRNAsMuscle DevelopmentMusclesMuscular Dystrophy, FacioscapulohumeralProteinsRibonuclease IIIDEAD-box RNA HelicasesDICER1 protein, humanFragile X Messenger Ribonucleoprotein 1MicroRNAsProteinsRibonuclease III

Identifiers

PMID20519410
PMCPMC2905753
OpenAlexW2152340020

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.