Evidence map›Paper›PMID 20513406›Full record

ArticleBiophysical journal2010

The conserved L5 loop establishes the pre-powerstroke conformation of the Kinesin-5 motor, eg5.

Adam G Larson, Nariman Naber, Roger Cooke, Edward Pate, Sarah E Rice

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Mechanism and regulation of kinesin motors.Nature reviews. Molecular cell biology · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. The structural kinetics of switch-1 and the neck linker explain the functions of kinesin-1 and Eg5.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  13. Article
  14. Article
  15. Model-independent decomposition of two-state data.Physical review. E, Statistical, nonlinear, and soft matter physics · 2013
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Adam G LarsonDepartment of Cell and Molecular Biology, Northwestern University, Chicago, Illinois, USA.
Nariman Naber
Roger Cooke
Edward Pate
Sarah E Rice
Northwestern University · USUniversity of California, San Francisco · USWashington State University · US

Funding

STRUCTURE/FUNCTION OF MOLECULAR MOTORSP01AR042895 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COOKE, ROGER A · 1994 to 2008
$9.8M
The Mechanism of Kinesin Self-RegulationR01GM072656 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI RICE, SARAH E. · 2005 to 2014
$2.5M
Analysis of Motor Protein FunctionR01GM077067 · NIGMS · WASHINGTON STATE UNIVERSITY · PI PATE, EDWARD F · 2006 to 2009
$1.1M
NIAMS NIH HHS AR042895NIAMS NIH HHS P01 AR042895NIGMS NIH HHS GM072656NIGMS NIH HHS GM077067NIGMS NIH HHS R01 GM072656NIGMS NIH HHS R01 GM077067
6 · The paper itself

Abstract

Kinesin superfamily motor proteins contain a structurally conserved loop near the ATP binding site, termed L5. The function of L5 is unknown, although several drug inhibitors of the mitotic kinesin Eg5 bind to L5. We used electron paramagnetic resonance spectroscopy (EPR) to investigate the function of L5 in Eg5. We site-specifically attached EPR probes to ADP, L5, and the neck linker element that docks along the enzymatic head to drive forward motility on microtubules (MTs). Nucleotide-dependent spectral mobility shifts occurred in all of these structural elements, suggesting that they undergo coupled conformational changes. These spectral shifts were altered by deletion of L5 or addition of S-trityl-l-cysteine (STLC), an allosteric inhibitor that binds to L5. In particular, EPR probes attached to the neck linker of MT-bound Eg5 shifted to a more immobilized component in the nucleotide-free state relative to the ADP-bound state, consistent with the neck linker docking upon ADP release. In contrast, after L5 deletion or STLC addition, EPR spectra were highly immobilized in all nucleotide states. We conclude that L5 undergoes a conformational change that enables Eg5 to bind to MTs in a pre-powerstroke state. Deletion or inhibition of L5 with the small-molecule inhibitor STLC blocks this pre-powerstroke state, forcing the Eg5 neck linker to dock regardless of the nucleotide state.

Indexed as

Allosteric RegulationCysteineElectron Spin Resonance SpectroscopyEscherichia coliKinesinsMicrotubulesModels, MolecularMotionProtein Conformation3-tritylthio-L-alanineCysteineKinesins

Identifiers

PMID20513406
PMCPMC2877332
OpenAlexW2027968078

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.