Evidence map›Paper›PMID 20513395›Full record

ArticleBiophysical journal2010

Predicting local SR Ca(2+) dynamics during Ca(2+) wave propagation in ventricular myocytes.

Hena R Ramay, M Saleet Jafri, W Jonathan Lederer, Eric A Sobie

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 36 citations in OpenAlex.

  1. Role of ryanodine receptor cooperativity in CaThe Journal of physiology · 2024
    Article
  2. Article
  3. Article
  4. Excitation-contraction coupling and calcium release in atrial muscle.Pflugers Archiv : European journal of physiology · 2021
    Review
  5. Pharmacological Modulation of Mitochondrial CaFrontiers in physiology · 2018
    Article
  6. Article
  7. Review
  8. Ambiguous interactions between diastolic and SR CaThe Journal of general physiology · 2017
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Calcium movements inside the sarcoplasmic reticulum of cardiac myocytes.Journal of molecular and cellular cardiology · 2013
    Review
  15. Ca²⁺ waves in the heart.Journal of molecular and cellular cardiology · 2013
    Review
  16. Article
  17. Article
  18. Computational approaches to understand cardiac electrophysiology and arrhythmias.American journal of physiology. Heart and circulatory physiology · 2012
    Review
  19. Article
  20. How cells process information: quantification of spatiotemporal signaling dynamics.Protein science : a publication of the Protein Society · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Hena R RamayPharmacology and Systems Therapeutics, Mount Sinai School of Medicine, New York, New York, USA.
M Saleet Jafri
W Jonathan Lederer
Eric A Sobie
George Mason University · USIcahn School of Medicine at Mount Sinai · USUniversity of Maryland, Baltimore · US

Funding

System Biology Center in New YorkP50GM071558 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZAPH, SUSANA NEVES · 2007 to 2017
$22.8M
Sarcoplasmic reticulum calcium leak and calcium instability in cardiac myocytesR01HL076230 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SOBIE, ERIC A · 2005 to 2013
$3.0M
NHLBI NIH HHS HL076230NHLBI NIH HHS R01 HL076230NIGMS NIH HHS GM071558NIGMS NIH HHS P50 GM071558
6 · The paper itself

Abstract

Of the many ongoing controversies regarding the workings of the sarcoplasmic reticulum (SR) in cardiac myocytes, two unresolved and interconnected topics are 1), mechanisms of calcium (Ca(2+)) wave propagation, and 2), speed of Ca(2+) diffusion within the SR. Ca(2+) waves are initiated when a spontaneous local SR Ca(2+) release event triggers additional release from neighboring clusters of SR release channels (ryanodine receptors (RyRs)). A lack of consensus regarding the effective Ca(2+) diffusion constant in the SR (D(Ca,SR)) severely complicates our understanding of whether dynamic local changes in SR [Ca(2+)] can influence wave propagation. To address this problem, we have implemented a computational model of cytosolic and SR [Ca(2+)] during Ca(2+) waves. Simulations have investigated how dynamic local changes in SR [Ca(2+)] are influenced by 1), D(Ca,SR); 2), the distance between RyR clusters; 3), partial inhibition or stimulation of SR Ca(2+) pumps; 4), SR Ca(2+) pump dependence on cytosolic [Ca(2+)]; and 5), the rate of transfer between network and junctional SR. Of these factors, D(Ca,SR) is the primary determinant of how release from one RyR cluster alters SR [Ca(2+)] in nearby regions. Specifically, our results show that local increases in SR [Ca(2+)] ahead of the wave can potentially facilitate Ca(2+) wave propagation, but only if SR diffusion is relatively slow. These simulations help to delineate what changes in [Ca(2+)] are possible during SR Ca(2+)release, and they broaden our understanding of the regulatory role played by dynamic changes in [Ca(2+)](SR).

Indexed as

Computer SimulationModels, CardiovascularAlgorithmsAnimalsCalciumCytoplasmCytosolDiffusionHeart VentriclesKineticsMyocytes, CardiacRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumSarcoplasmic Reticulum Calcium-Transporting ATPasesCalciumRyanodine Receptor Calcium Release ChannelSarcoplasmic Reticulum Calcium-Transporting ATPases

Identifiers

PMID20513395
PMCPMC2877363
OpenAlexW2048961320

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.