ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010
Fine mapping a QTL qCTB7 for cold tolerance at the booting stage on rice chromosome 7 using a near-isogenic line.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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38 citing papers in PubMed, 96 citations in OpenAlex.
- ABA seed priming alleviates low-temperature-induced inhibition.Frontiers in plant science · 2026Article
- Natural variation in CTF1 conferring cold tolerance at the flowering stage in rice.Plant biotechnology journal · 2025Article
- Natural variation of CTB5 confers cold adaptation in plateau japonica rice.Nature communications · 2025Article
- QTL detection and candidate gene identification ofMolecular breeding : new strategies in plant improvement · 2024Article
- Advances and opportunities in unraveling cold-tolerance mechanisms in the world's primary staple food crops.The plant genome · 2024Review
- qCTB7 positively regulates cold tolerance at booting stage in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- WRKY53 negatively regulates rice cold tolerance at the booting stage by fine-tuning anther gibberellin levels.The Plant cell · 2022Article
- Identification of cold tolerance QTLs at the bud burst stage in 211 rice landraces by GWAS.BMC plant biology · 2021Article
- Genome-Wide Association Study Reveals the Genetic Basis of Chilling Tolerance in Rice at the Reproductive Stage.Plants (Basel, Switzerland) · 2021Article
- NILs of Cold TolerantFrontiers in genetics · 2021Article
- Differentiation, evolution and utilization of natural alleles for cold adaptability at the reproductive stage in rice.Plant biotechnology journal · 2020Article
- Identification of candidate genes controlling chilling tolerance of rice in the cold region at the booting stage by BSA-Seq and RNA-Seq.Royal Society open science · 2020Article
- Comprehensive Evaluation and Analysis of the Mechanism of Cold Tolerance Based on the Transcriptome of Weedy Rice Seedlings.Rice (New York, N.Y.) · 2020Article
- Identification of main-effect quantitative trait loci (QTLs) for low-temperature stress tolerance germination- and early seedling vigor-related traits in rice (Molecular breeding : new strategies in plant improvement · 2020Article
- Identification of a cold-tolerant locus in rice (Oryza sativa L.) using bulked segregant analysis with a next-generation sequencing strategy.Rice (New York, N.Y.) · 2018Article
- Genetic dissection of early-season cold tolerance in sorghum: genome-wide association studies for seedling emergence and survival under field and controlled environment conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- QTL and QTL networks for cold tolerance at the reproductive stage detected using selective introgression in rice.PloS one · 2018Article
- Fine mapping of QTL qCTB10-2 that confers cold tolerance at the booting stage in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Overexpression of a New Zinc Finger Protein Transcription FactorInternational journal of genomics · 2018Article
- Natural variation in CTB4a enhances rice adaptation to cold habitats.Nature communications · 2017Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Low temperature at the booting stage is a serious abiotic stress in rice, and cold tolerance is a complex trait controlled by many quantitative trait loci (QTL). A QTL for cold tolerance at the booting stage in cold-tolerant near-isogenic rice line ZL1929-4 was analyzed. A total of 647 simple sequence repeat (SSR) markers distributed across 12 chromosomes were used to survey for polymorphisms between ZL1929-4 and the cold-sensitive japonica cultivar Towada, and nine were polymorphic. Single marker analysis revealed that markers on chromosome 7 were associated with cold tolerance. By interval mapping using an F(2) population from ZL1929-4 x Towada, a QTL for cold tolerance was detected on the long arm of chromosome 7. The QTL explained 9 and 21% of the phenotypic variances in the F(2) and F(3) generations, respectively. Recombinant plants were screened for two flanking markers, RM182 and RM1132, in an F(2) population with 2,810 plants. Two-step substitution mapping suggested that the QTL was located in a 92-kb interval between markers RI02905 and RM21862. This interval was present in BAC clone AP003804. We designated the QTL as qCTB7 (quantitative trait locus for cold tolerance at the booting stage on chromosome 7), and identified 12 putative candidate genes.
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