Evidence map›Paper›PMID 20507993›Full record

ArticleThe Journal of biological chemistry2010

The NC2 domain of collagen IX provides chain selection and heterotrimerization.

Sergei P Boudko, Keith D Zientek, Jesse Vance, Jessica L Hacker, Jürgen Engel, Hans Peter Bächinger

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Around the collagen triple helix: an introduction to studying associated genetic and acquired diseases.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Review
  2. Article
  3. Deciphering the folding code of collagens.Nature communications · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Collagen Mimetic Peptides.Bioengineering (Basel, Switzerland) · 2021
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The collagen family.Cold Spring Harbor perspectives in biology · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sergei P BoudkoResearch Department, Shriners Hospital for Children, Portland, OR 97239, USA.
Keith D Zientek
Jesse Vance
Jessica L Hacker
Jürgen Engel
Hans Peter Bächinger

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanism of chain selection and trimerization of fibril-associated collagens with interrupted triple helices (FACITs) differs from that of fibrillar collagens that have special C-propeptides. We recently showed that the second carboxyl-terminal non-collagenous domain (NC2) of homotrimeric collagen XIX forms a stable trimer and substantially stabilizes a collagen triple helix attached to either end. We then hypothesized a general trimerizing role for the NC2 domain in other FACITs. Here we analyzed the NC2 domain of human heterotrimeric collagen IX, the only member of FACITs with all three chains encoded by distinct genes. Upon oxidative folding of equimolar amounts of the alpha1, alpha2, and alpha3 chains of NC2, a stable heterotrimer with a disulfide bridge between alpha1 and alpha3 chains is formed. Our experiments show that this heterotrimerization domain can stabilize a short triple helix attached at the carboxyl-terminal end and allows for the proper oxidation of the cystine knot of type III collagen after the short triple helix.

Indexed as

Amino Acid SequenceCircular DichroismCloning, MolecularCollagen Type IXC-PeptideDimerizationHumansMolecular Sequence DataOxygenProtein BindingProtein Structure, TertiaryRecombinant ProteinsSequence Homology, Amino AcidThermodynamicsThrombinCollagen Type IXC-PeptideOxygenRecombinant ProteinsThrombin

Identifiers

PMID20507993
PMCPMC2911272

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.