Evidence map›Paper›PMID 20507321›Full record

ArticleCancer science2010

DNA methylation of interferon regulatory factors in gastric cancer and noncancerous gastric mucosae.

Masaki Yamashita, Minoru Toyota, Hiromu Suzuki, Masanori Nojima, Eiichiro Yamamoto, Seiko Kamimae, Yoshiyuki Watanabe, Masahiro Kai, Hirofumi Akashi, Reo Maruyama and 7 more

Open access · greenAbstract read
In one paragraph

Article in Cancer science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 58 citations in OpenAlex.

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  12. Frontiers in cell and developmental biology · 2021
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  17. Elementary screening of lymph node metastatic-related genes in gastric cancer based on the co-expression network of messenger RNA, microRNA and long non-coding RNA.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Masaki YamashitaDepartment of Gastroenterology and Hepatology, St. Marianna Medical University, School of Medicine, Kawasaki, Japan.
Minoru Toyota
Hiromu Suzuki
Masanori Nojima
Eiichiro Yamamoto
Seiko Kamimae
Yoshiyuki Watanabe
Masahiro Kai
Hirofumi Akashi
Reo Maruyama
Yasushi Sasaki
Hiroo Yamano
Tamotsu Sugai
Yasuhisa Shinomura
Kohzoh Imai
Takashi Tokino
Fumio Itoh
St. Marianna University School of Medicine · JPAkita Red Cross Hospital · JPIwate Medical University · JPSapporo Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interferon regulatory factors (IRFs) are transcription factors known to play key roles in innate and adaptive immune responses, cell growth, apoptosis, and development. Their function in tumorigenesis of gastric cancer remains to be determined, however. In the present study, therefore, we examined epigenetic inactivation of IRF1-9 in a panel of gastric cancer cell lines. We found that expression of IRF4, IRF5, and IRF8 was frequently suppressed in gastric cancer cell lines; that methylation of the three genes correlated with their silencing; and that treating the cells with the demethylating agent 5-aza-2'-deoxycytidine (DAC) restored their expression. Expression of IRF5 in cancer cells was enhanced by the combination of DAC treatment and adenoviral vector-mediated expression of p53, p63, or p73. Interferon-gamma-induced expression of IRF8 was also enhanced by DAC. Moreover, treating gastric cancer cells with DAC enhanced the suppressive effects of interferon-alpha, interferon-beta, and interferon-gamma on cell growth. Among a cohort of 455 gastric cancer and noncancerous gastric tissue samples, methylation of IRF4 was frequently observed in both gastric cancer specimens and noncancerous specimens of gastric mucosa from patients with multiple gastric cancers, which suggests IRF4 methylation could be a useful molecular marker for diagnosing recurrence of gastric cancers. Our findings indicate that epigenetic IRF inactivation plays a key role in tumorigenesis of gastric cancer, and that inhibition of DNA methylation may restore the antitumor activity of interferons through up-regulation of IRFs.

Indexed as

DNA MethylationAgedAzacitidineCell Line, TumorDecitabineDNA, NeoplasmDown-RegulationFemaleGastric MucosaGene Expression Regulation, NeoplasticGene SilencingHumansInterferon Regulatory Factor-1Interferon Regulatory Factor-4Interferon Regulatory Factor-8Interferon Regulatory FactorsAzacitidineDecitabineDNA, NeoplasmInterferon Regulatory Factor-1Interferon Regulatory Factor-4Interferon Regulatory Factor-8Interferon Regulatory FactorsIRF5 protein, human

Identifiers

PMID20507321
PMCPMC11158968
OpenAlexW2000151135

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.