Evidence map›Paper›PMID 20507091›Full record

ArticleJournal of the American Chemical Society2010

A radical on the Met-Tyr-Trp modification required for catalase activity in catalase-peroxidase is established by isotopic labeling and site-directed mutagenesis.

Xiangbo Zhao, Javier Suarez, Abdelahad Khajo, Shengwei Yu, Leonid Metlitsky, Richard S Magliozzo

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Catalase-peroxidase (KatG): a potential frontier in tuberculosis drug development.Critical reviews in biochemistry and molecular biology · 2024
    Review
  4. Article
  5. A new regime of heme-dependent aromatic oxygenase superfamily.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The 2.2 Å resolution structure of the catalase-peroxidase KatG from Synechococcus elongatus PCC7942.Acta crystallographica. Section F, Structural biology communications · 2014
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xiangbo ZhaoDepartment of Chemistry, Brooklyn College, 2900 Bedford Avenue, Brooklyn, New York 11210, USA.
Javier Suarez
Abdelahad Khajo
Shengwei Yu
Leonid Metlitsky
Richard S Magliozzo
City University of New York · USBrooklyn College · US

Funding

Catalysis of isoniazid action by M tuberculosis KatGR01AI060014 · NIAID · BROOKLYN COLLEGE · PI MAGLIOZZO, RICHARD S · 2005 to 2009
$1.7M
NIAID NIH HHS R01 AI060014NIAID NIH HHS R01-AI060014
6 · The paper itself

Abstract

A transient tyrosyl-like radical with a narrow doublet X-band EPR signal is present during catalase turnover by Mycobacterium tuberculosis catalase-peroxidase (KatG). Labeling of KatG with beta-methylene-deuterated tyrosine causes a collapse of the doublet to a singlet, while for 3,5-ring-deuterated tyrosine-labeled enzyme, no changes occur in the EPR signal. Except for the replacement Tyr229Phe, all other single-tyrosine mutants of KatG exhibit the same narrow doublet EPR signal and catalase activity similar to that of the wild-type enzyme. These findings confirm that this catalytically competent radical is associated with Tyr229, whose 3' and 5' protons are replaced as a result of cross-links with neighboring Met255 and Trp107 side chains in the post-translationally modified enzyme containing a distal-side Met255-Tyr229-Trp107 adduct.

Indexed as

Mutagenesis, Site-DirectedBacterial ProteinsBiocatalysisCatalaseElectron Spin Resonance SpectroscopyFree RadicalsIsotope LabelingModels, MolecularMycobacterium tuberculosisPeroxidasesProtein ConformationBacterial ProteinsCatalasecatalase-peroxidase, bacteriaFree RadicalsPeroxidases

Identifiers

PMID20507091
PMCPMC2897066
OpenAlexW1967267158

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.