Evidence map›Paper›PMID 20506139›Full record

ArticleHuman mutation2010

Structures and molecular mechanisms for common 15q13.3 microduplications involving CHRNA7: benign or pathological?

Przemyslaw Szafranski, Christian P Schaaf, Richard E Person, Ian B Gibson, Zhilian Xia, Sangeetha Mahadevan, Joanna Wiszniewska, Carlos A Bacino, Seema Lalani, Lorraine Potocki and 8 more

Abstract read
In one paragraph

Article in Human mutation, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 142 citations in OpenAlex.

  1. Article
  2. Distinct mechanisms of CNV formation at the human 15q13.3 locus.bioRxiv : the preprint server for biology · 2026
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  3. Scalable and comprehensive mosaic variant calling using DRAGEN.medRxiv : the preprint server for health sciences · 2026
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  4. Article
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  6. A Novel De NovoGenes · 2024
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Screening for Copy Number Variations of the 15q13.3 Hotspot inCurrent issues in molecular biology · 2021
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Przemyslaw SzafranskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Christian P Schaaf
Richard E Person
Ian B Gibson
Zhilian Xia
Sangeetha Mahadevan
Joanna Wiszniewska
Carlos A Bacino
Seema Lalani
Lorraine Potocki
Sung-Hae Kang
Ankita Patel
Sau Wai Cheung
Frank J Probst
Brett H Graham
Marwan Shinawi
Arthur L Beaudet
Pawel Stankiewicz
Baylor College of Medicine · US

Funding

MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
Human neurobehavioral phenotypes associates with the extended PWS/AS domainR01HD037283 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI BEAUDET, ARTHUR L. · 1999 to 2014
$8.4M
NICHD NIH HHS R01 HD037283NIGMS NIH HHS T32 GM007526
6 · The paper itself

Abstract

We have investigated four approximately 1.6-Mb microduplications and 55 smaller 350-680-kb microduplications at 15q13.2-q13.3 involving the CHRNA7 gene that were detected by clinical microarray analysis. Applying high-resolution array-CGH, we mapped all 118 chromosomal breakpoints of these microduplications. We also sequenced 26 small microduplication breakpoints that were clustering at hotspots of nonallelic homologous recombination (NAHR). All four large microduplications likely arose by NAHR between BP4 and BP5 LCRs, and 54 small microduplications arose by NAHR between two CHRNA7-LCR copies. We identified two classes of approximately 1.6-Mb microduplications and five classes of small microduplications differing in duplication size, and show that they duplicate the entire CHRNA7. We propose that size differences among small microduplications result from preexisting heterogeneity of the common BP4-BP5 inversion. Clinical data and family histories of 11 patients with small microduplications involving CHRNA7 suggest that these microduplications might be associated with developmental delay/mental retardation, muscular hypotonia, and a variety of neuropsychiatric disorders. However, we conclude that these microduplications and their associated potential for increased dosage of the CHRNA7-encoded alpha 7 subunit of nicotinic acetylcholine receptors are of uncertain clinical significance at present. Nevertheless, if they prove to have a pathological effects, their high frequency could make them a common risk factor for many neurobehavioral disorders.

Indexed as

Chromosome AberrationsGene Duplicationalpha7 Nicotinic Acetylcholine ReceptorChildChild, PreschoolChromosome BreakageChromosome DisordersChromosomes, Human, Pair 15Comparative Genomic HybridizationDevelopmental DisabilitiesFamily HealthFemaleHumansIntellectual DisabilityMaleMental Disordersalpha7 Nicotinic Acetylcholine ReceptorChrna7 protein, humanReceptors, Nicotinic

Identifiers

PMID20506139
PMCPMC3162316
OpenAlexW2024129111

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.