Evidence map›Paper›PMID 20505343›Full record

ArticleEpigenetics2010

Interplay of bromodomain and histone acetylation in the regulation of p300-dependent genes.

Jihong Chen, Feras M Ghazawi, Qiao Li

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  6. Review
  7. Article
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  11. Article
  12. Article
  13. Design of small molecule epigenetic modulators.Bioorganic & medicinal chemistry letters · 2014
    Review
  14. Article
  15. Review
  16. ING1 and ING2: multifaceted tumor suppressor genes.Cellular and molecular life sciences : CMLS · 2013
    Review
  17. Article
  18. Article
  19. Epigenetics and bacterial infections.Cold Spring Harbor perspectives in medicine · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Jihong ChenDepartment of 1Pathology and Laboratory Medicine, University of Ottawa, Ontario, Canada.
Feras M Ghazawi
Qiao Li
Ottawa University · USUniversity of Ottawa · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The bromodomain is an evolutionarily conserved motif found in many transcriptional activators including p300 which contains an intrinsic histone acetyltransferase activity and is a general coactivator for many transcription factors. One mode of bromodomain action is to serve as a binding module to recognize specific acetyl-lysine residue of histones during chromatin remodeling and transcriptional activation. The function of p300 is required for diverse sets of gene expression. However, it is not known whether the p300 bromodomain is involved in the expression of all or only subset of p300-dependent genes. In this study, we examined the impact of either wild type or a bromo-deficient p300 on the expression of several p300-dependant genes. The effects of histone acetylation on the expression of these genes were also assessed by targeting histone deacetylase activities with an inhibitor approach. We show that the impact of these inhibitors on the transcriptional activation of p300-dependent genes are impaired in cells containing the bromo-deficient p300, indicating that the interplay of p300 and histone acetylation in p300-dependent gene transcription requires the bromodomain. We also observed an increase in the expression of bromo-deficient p300 at the level of transcription possibly to compensate for the loss of p300 function. However, the high level of bromo-deficient p300 is not able to maintain the basal level of histone acetylation. Thus, the bromodomain is important for p300 to maintain the basal level of histone acetylation and to induce the transcriptional activation of p300-dependent genes. Nevertheless, the requirement of bromodomain and histone acetylation in p300-dependent gene transcription is determined by a gene specific manner.

Indexed as

Gene Expression RegulationGenesAcetylationButyratesCell Line, TumorEnzyme InhibitorsGene Expression ProfilingHeLa CellsHistone Deacetylase InhibitorsHistonesHumansHydroxamic Acidsp300-CBP-Associated Factorp300-CBP Transcription FactorsProtein Structure, TertiaryValproic AcidButyratesEnzyme InhibitorsHistone Deacetylase InhibitorsHistonesHydroxamic Acidsp300-CBP-Associated Factorp300-CBP Transcription Factorstrichostatin AValproic Acid

Identifiers

PMID20505343
PMCPMC3322497
OpenAlexW2072419481

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.