Evidence map›Paper›PMID 20505071›Full record

ArticleMolecular biology of the cell2010

Scyl1 facilitates nuclear tRNA export in mammalian cells by acting at the nuclear pore complex.

Shawn C Chafe, Dev Mangroo

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Recurrent acute liver failure associated with novelWorld journal of clinical cases · 2019
    Article
  12. Overlapping Role of SCYL1 and SCYL3 in Maintaining Motor Neuron Viability.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  13. Article
  14. Article
  15. SCYL pseudokinases in neuronal function and survival.Neural regeneration research · 2016
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. An early onset progressive motor neuron disorder in Scyl1-deficient mice is associated with mislocalization of TDP-43.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Shawn C ChafeDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON N1G 2W1, Canada.
Dev Mangroo
University of Guelph · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Scyl1 is an evolutionarily conserved N-terminal protein kinase-like domain protein that plays a role in COP1-mediated retrograde protein trafficking in mammalian cells. Furthermore, loss of Scyl1 function has been shown to result in neurodegenerative disorders in mice. Here, we report that Scyl1 is also a cytoplasmic component of the mammalian nuclear tRNA export machinery. Like exportin-t, overexpression of Scyl1 restored export of a nuclear export-defective serine amber suppressor tRNA mutant in COS-7 cells. Scyl1 binds tRNA saturably, and associates with the nuclear pore complex by interacting, in part, with Nup98. Scyl1 copurifies with the nuclear tRNA export receptors exportin-t and exportin-5, the RanGTPase, and the eukaryotic elongation factor eEF-1A, which transports aminoacyl-tRNAs to the ribosomes. Scyl1 interacts directly with exportin-t and RanGTP but not with eEF-1A or RanGDP in vitro. Moreover, exportin-t containing tRNA, Scyl1, and RanGTP form a quaternary complex in vitro. Biochemical characterization also suggests that the nuclear aminoacylation-dependent pathway is primarily responsible for tRNA export in mammalian cells. These findings together suggest that Scyl1 participates in the nuclear aminoacylation-dependent tRNA export pathway and may unload aminoacyl-tRNAs from the nuclear tRNA export receptor at the cytoplasmic side of the nuclear pore complex and channels them to eEF-1A.

Indexed as

Active Transport, Cell NucleusAdaptor Proteins, Vesicular TransportAnimalsCell ExtractsChlorocebus aethiopsCodon, NonsenseCOS CellsDNA-Binding ProteinsGene Knockdown TechniquesHeLa CellsHumansKaryopherinsNuclear PoreNuclear Pore Complex ProteinsPeptide Elongation Factor 1Protein BindingAdaptor Proteins, Vesicular TransportCell ExtractsCodon, NonsenseDNA-Binding ProteinsKaryopherinsnuclear pore complex protein 98Nuclear Pore Complex ProteinsPeptide Elongation Factor 1ran GTP-Binding ProteinRNA, TransferRNA, Transfer, Amino AcylSCYL1 protein, humanTranscription Factors

Identifiers

PMID20505071
PMCPMC2903676
OpenAlexW2110473563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.