Evidence map›Paper›PMID 20503427›Full record

ArticleThe Journal of comparative neurology2010

Expression of BK-type calcium-activated potassium channel splice variants during chick cochlear development.

Jung-Min Kim, Ryan Beyer, Marti Morales, Stephanie Chen, Li Qian Liu, R Keith Duncan

Abstract read
In one paragraph

Article in The Journal of comparative neurology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. The mechanism of CaThe Journal of biological chemistry · 2025
    Article
  3. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Gene expression gradients along the tonotopic axis of the chicken auditory epithelium.Journal of the Association for Research in Otolaryngology : JARO · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jung-Min KimKresge Hearing Research Institute, University of Michigan, Ann Arbor, Michigan 48109, USA.
Ryan Beyer
Marti Morales
Stephanie Chen
Li Qian Liu
R Keith Duncan
University of Michigan–Ann Arbor · USZero to Three · US

Funding

Scientific Synergy CoreP30DC005188 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DOLAN, DAVID FRANCIS · 2002 to 2016
$10.3M
BK channel regulation in auditory hair cellsR01DC007432 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DUNCAN, ROBERT KEITH · 2006 to 2010
$2.1M
Closure of Retinal Holes with Biodegradable PolymersR44EY012332 · NEI · CALHOUN VISION, INC. · PI DUNCAN, KEITH G · 2002 to 2003
$759k
NEI NIH HHS R44 EY012332NIDCD NIH HHS P30 DC005188NIDCD NIH HHS P30-DC05188NIDCD NIH HHS R01 DC007432NIDCD NIH HHS R01-DC07432
6 · The paper itself

Abstract

The appearance of large-conductance, calcium-activated potassium (BK) current is a hallmark of functional maturation in auditory hair cells. Acquisition of this fast-activating current enables high-frequency, graded receptor potentials in all vertebrates and an electrical tuning mechanism in nonmammals. The gene encoding BK alpha subunits is highly alternatively spliced, and the resulting variations in channel isoforms may contribute to functional diversity at the onset of hearing. We examined the tissue specificity of nine BK alpha alternative exons and investigated changes in expression during chick cochlear development using quantitative polymerase chain reaction (qPCR). Each alternative was widely expressed in several tissues except for an insert near the C-terminus Ca(2+) sensing domain, which appeared brain-specific. The only alternative form in the membrane-bound core of the channel was expressed in brain and muscle but was undetected in cochlea. Of the remaining variants, three increased in expression prior to the onset of hearing and acquisition of BK currents. These three variants cause decreased Ca(2+) sensitivity or increased intracellular retention, traits that would not easily explain the advent of calcium-sensitive currents at embryonic day (E)18-19. Expression levels of other variants were mature and stable by E15, days before currents were acquired. Surface expression of C-terminal isoforms was examined using patch-clamp electrophysiology and immunocytochemistry. C-terminal variants that exhibit robust surface expression appeared in the membrane at E18, even though transcripts were unchanged during development starting from E12. These results indicate that delays in protein synthesis and trafficking/scaffolding of channel subunits underlie the late acquisition of BK currents in cochlear hair cells.

Indexed as

Amino Acid SequenceAnimalsAvian ProteinsBrainCell LineCell MembraneChick EmbryoChickensCochleaExonsHair Cells, AuditoryHumansLarge-Conductance Calcium-Activated Potassium ChannelsMuscle DevelopmentMusclesProtein IsoformsAvian ProteinsLarge-Conductance Calcium-Activated Potassium ChannelsProtein Isoforms

Identifiers

PMID20503427
PMCPMC3480179
OpenAlexW2123063888

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.