Evidence map›Paper›PMID 20503108›Full record

ArticleMedical oncology (Northwood, London, England)2011

VARS2 V552V variant as prognostic marker in patients with early breast cancer.

Yee Soo Chae, Soo Jung Lee, Joon Ho Moon, Byung Woog Kang, Jong Gwang Kim, Sang Kyun Sohn, Jin Hyang Jung, Ho Yong Park, Ji Young Park, Hye Jung Kim and 1 more

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Article in Medical oncology (Northwood, London, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

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0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yee Soo ChaeDepartment of Oncology/Hematology, Kyungpook National University Hospital, Kyungpook National University School of Medicine, 50 Samduk 2-Ga, Jung-Gu, Daegu, Korea.
Soo Jung Lee
Joon Ho Moon
Byung Woog Kang
Jong Gwang Kim
Sang Kyun Sohn
Jin Hyang Jung
Ho Yong Park
Ji Young Park
Hye Jung Kim
Sang-Woo Lee

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study analyzed the polymorphisms of DNA repair genes and their impact on the survival of 240 patients with early breast cancer. The genomic DNA was extracted from paraffin-embedded tumor-free tissue or blood, and thirteen polymorphisms in 12 DNA repair genes were determined using the Sequenom Mass array system. Among the target polymorphisms, VARS2 rs2074511 and POLE rs5744857 were found to correlate with survival after curative surgery in a log-rank test. No difference was found in the clinical and tumor characteristics according to the genotypes of these two coding variants, except for a higher incidence of positive ER in patients with the GG genotype of POLE rs5744857 (P=0.025). Meanwhile, a multivariate analysis showed that the GG genotype of VARS2 V552 V (rs2301717) was significantly associated with disease-free survival (DFS; HR=0.298; P=0.044) and marginally with distant DFS (DDFS; HR=0.266; P=0.077). In particular, the VARS2 rs2074511 polymorphism was only associated with survival in patients with triple negative (TN)-type breast cancer (P=0.018 for DFS and 0.042 for DDFS, respectively). In conclusion, VARS2 V552V may be considered as a prognostic factor for survival in patients with early breast cancer.

Indexed as

AdultAgedAged, 80 and overBiomarkers, TumorBreast NeoplasmsDisease-Free SurvivalDNA RepairFemaleGenotypeHLA AntigensHumansKaplan-Meier EstimateMiddle AgedNeoplasm GradingNeoplasm StagingPolymerase Chain ReactionBiomarkers, TumorHLA AntigensValine-tRNA LigaseVARS2 protein, human

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.