Evidence map›Paper›PMID 20502708›Full record

ArticlePloS one2010

Alternative splicing of sept9a and sept9b in zebrafish produces multiple mRNA transcripts expressed throughout development.

Megan L Landsverk, Douglas C Weiser, Mark C Hannibal, David Kimelman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Use of zebrafish to studyDisease models & mechanisms · 2018
    Review
  4. Article
  5. Expression ofFrontiers in neuroanatomy · 2017
    Article
  6. Article
  7. Zebrafish as a model to study the role of DNA methylation in environmental toxicology.Environmental science and pollution research international · 2015
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Megan L LandsverkDepartment of Pediatrics, University of Washington, Seattle, Washington, United States of America.
Douglas C Weiser
Mark C Hannibal
David Kimelman
University of Washington · USBaylor College of Medicine · USUniversity of the Pacific · US

Funding

Regulation of Mesodermal Progenitors in Transgenic ZebrafishR01GM079203 · NIGMS · UNIVERSITY OF WASHINGTON · PI KIMELMAN, DAVID · 2008 to 2020
$4.0M
MOLECULAR BASIS OF HEREDITARY NEURALGIC AMYOTROPHYR01NS038181 · NINDS · UNIVERSITY OF WASHINGTON · PI HANNIBAL, MARK CHARLES · 1998 to 2008
$1.7M
Regulation of Gastrulation by GravinF32HD053189 · NICHD · UNIVERSITY OF WASHINGTON · PI WEISER, DOUGLAS C · 2006 to 2008
$145k
NICHD NIH HHS F32 HD053189NICHD NIH HHS F32HD053189NIGMS NIH HHS GM079203NIGMS NIH HHS R01 GM079203NINDS NIH HHS NS38181NINDS NIH HHS R01 NS038181
6 · The paper itself

Abstract

backgroundSeptins are involved in a number of cellular processes including cytokinesis and organization of the cytoskeleton. Alterations in human septin-9 (SEPT9) levels have been linked to multiple cancers, whereas mutations in SEPT9 cause the episodic neuropathy, hereditary neuralgic amyotrophy (HNA). Despite its important function in human health, the in vivo role of SEPT9 is unknown. METHODOLOGY/PRINCIPAL

findingsHere we utilize zebrafish to study the role of SEPT9 in early development. We show that zebrafish possess two genes, sept9a and sept9b that, like humans, express multiple transcripts. Knockdown or overexpression of sept9a transcripts results in specific developmental alterations including circulation defects and aberrant epidermal development. CONCLUSIONS/SIGNIFICANCE: Our work demonstrates that sept9 plays an important role in zebrafish development, and establishes zebrafish as a valuable model organism for the study of SEPT9.

Indexed as

Gene Expression Regulation, DevelopmentalAlternative SplicingAmino Acid SequenceAnimalsCell DeathConserved SequenceEmbryo, NonmammalianGene Knockdown TechniquesMolecular Sequence DataRNA, MessengerZebrafishZebrafish ProteinsRNA, MessengerZebrafish Proteins

Identifiers

PMID20502708
PMCPMC2873287
OpenAlexW2024253147

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.