Evidence map›Paper›PMID 20502662›Full record

ArticlePloS one2010

A 3D model of the membrane protein complex formed by the white spot syndrome virus structural proteins.

Yun-Shiang Chang, Wang-Jing Liu, Cheng-Chung Lee, Tsung-Lu Chou, Yuan-Ting Lee, Tz-Shian Wu, Jiun-Yan Huang, Wei-Tung Huang, Tai-Lin Lee, Guang-Hsiung Kou and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
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  7. Feasibility Study on the Use of Fly Maggots (Life (Basel, Switzerland) · 2021
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  20. Envelope protein VP24 from White spot syndrome virus: expression, purification and crystallization.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yun-Shiang ChangDepartment of Molecular Biotechnology, Da-Yeh University, Changhua, Taiwan. yschang@mail.dyu.edu.tw
Wang-Jing Liu
Cheng-Chung Lee
Tsung-Lu Chou
Yuan-Ting Lee
Tz-Shian Wu
Jiun-Yan Huang
Wei-Tung Huang
Tai-Lin Lee
Guang-Hsiung Kou
Andrew H-J Wang
Chu-Fang Lo
Dayeh University · TWNational Taiwan University · TWInstitute of Biological Chemistry, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOutbreaks of white spot disease have had a large negative economic impact on cultured shrimp worldwide. However, the pathogenesis of the causative virus, WSSV (whit spot syndrome virus), is not yet well understood. WSSV is a large enveloped virus. The WSSV virion has three structural layers surrounding its core DNA: an outer envelope, a tegument and a nucleocapsid. In this study, we investigated the protein-protein interactions of the major WSSV structural proteins, including several envelope and tegument proteins that are known to be involved in the infection process. PRINCIPAL

findingsIn the present report, we used coimmunoprecipitation and yeast two-hybrid assays to elucidate and/or confirm all the interactions that occur among the WSSV structural (envelope and tegument) proteins VP51A, VP19, VP24, VP26 and VP28. We found that VP51A interacted directly not only with VP26 but also with VP19 and VP24. VP51A, VP19 and VP24 were also shown to have an affinity for self-interaction. Chemical cross-linking assays showed that these three self-interacting proteins could occur as dimers.

conclusionsFrom our present results in conjunction with other previously established interactions we construct a 3D model in which VP24 acts as a core protein that directly associates with VP26, VP28, VP38A, VP51A and WSV010 to form a membrane-associated protein complex. VP19 and VP37 are attached to this complex via association with VP51A and VP28, respectively. Through the VP26-VP51C interaction this envelope complex is anchored to the nucleocapsid, which is made of layers of rings formed by VP664. A 3D model of the nucleocapsid and the surrounding outer membrane is presented.

Indexed as

Models, MolecularMembrane ProteinsNucleocapsidProtein BindingProtein MultimerizationProtein Structure, TertiaryReproducibility of ResultsViral Structural ProteinsWhite spot syndrome virus 1Membrane ProteinsViral Structural Proteins

Identifiers

PMID20502662
PMCPMC2873410
OpenAlexW1977071100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.