ArticleGenetics2010
Allelic variation in cell wall candidate genes affecting solid wood properties in natural populations and land races of Pinus radiata.
Article in Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
31 citing papers in PubMed.
- Integrating GWAS-guided markers preselection with genomic selection enhances prediction of pulpwood-related traits in slash pine (Pinus elliottii Englem.).BMC plant biology · 2026Article
- Multi-Approach Analysis Reveals Local Adaptation in a Widespread Forest Tree of Reunion Island.Plant & cell physiology · 2021Article
- Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce (Picea abies L. Karst) by whole genome resequencing and its transferability to other spruce species.Molecular ecology resources · 2021Article
- The Cytoskeleton and Its Role in Determining Cellulose Microfibril Angle in Secondary Cell Walls of Woody Tree Species.Plants (Basel, Switzerland) · 2020Review
- A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata.PloS one · 2019Article
- Association genetics of acetophenone defence against spruce budworm in mature white spruce.BMC plant biology · 2018Article
- Identification of novel putative causative genes and genetic marker for male sterility in Japanese cedar (Cryptomeria japonica D.Don).BMC genomics · 2018Article
- Drought Sensitivity of Norway Spruce at the Species' Warmest Fringe: Quantitative and Molecular Analysis Reveals High Genetic Variation Among and Within Provenances.G3 (Bethesda, Md.) · 2018Article
- Genome-Wide Association Studies to Improve Wood Properties: Challenges and Prospects.Frontiers in plant science · 2018Review
- Association genetics of phenolic needle compounds in Norway spruce with variable susceptibility to needle bladder rust.Plant molecular biology · 2017Article
- Allelic variation in PtoPsbW associated with photosynthesis, growth, and wood properties in Populus tomentosa.Molecular genetics and genomics : MGG · 2017Article
- Allelic Interactions amongFrontiers in plant science · 2017Article
- Field Guide to Plant Model Systems.Cell · 2016Review
- Genetic architecture of wood properties based on association analysis and co-expression networks in white spruce.The New phytologist · 2016Article
- Expression and functional analyses of a putative phenylcoumaran benzylic ether reductase in Arabidopsis thaliana.Plant cell reports · 2016Article
- Article
- Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.PloS one · 2016Article
- Article
- Functional multi-locus QTL mapping of temporal trends in Scots pine wood traits.G3 (Bethesda, Md.) · 2014Article
- Single-nucleotide polymorphisms in PtoCesA7 and their association with growth and wood properties in Populus tomentosa.Molecular genetics and genomics : MGG · 2014Article
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Forest trees are ideally suited to association mapping due to their high levels of diversity and low genomic linkage disequilibrium. Using an association mapping approach, single-nucleotide polymorphism (SNP) markers influencing quantitative variation in wood quality were identified in a natural population of Pinus radiata. Of 149 sites examined, 10 demonstrated significant associations (P < 0.05, q < 0.1) with one or more traits after accounting for population structure and experimentwise error. Without accounting for marker interactions, phenotypic variation attributed to individual SNPs ranged from 2 to 6.5%. Undesirable negative correlations between wood quality and growth were not observed, indicating potential to break negative correlations by selecting for individual SNPs in breeding programs. Markers that yielded significant associations were reexamined in an Australian land race. SNPs from three genes (PAL1, PCBER, and SUSY) yielded significant associations. Importantly, associations with two of these genes validated associations with density previously observed in the discovery population. In both cases, decreased wood density was associated with the minor allele, suggesting that these SNPs may be under weak negative purifying selection for density in the natural populations. These results demonstrate the utility of LD mapping to detect associations, even when the power to detect SNPs with small effect is anticipated to be low.
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Registered trials
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