Evidence map›Paper›PMID 20498037›Full record

ArticleProtein engineering, design & selection : PEDS2010

Antibody library screens using detergent-solubilized mammalian cell lysates as antigen sources.

Yong Ku Cho, Eric V Shusta

Open access · bronzeAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yong Ku ChoDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA.
Eric V Shusta
University of Wisconsin–Madison · US

Funding

Institutional Training in the Genomic SciencesT32HG002760 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI Qiongshi Lu · 2003 to 2026
$17.7M
Membrane Proteomics of the Blood-Brain BarrierR01NS052649 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI SHUSTA, ERIC V · 2006 to 2009
$1.3M
Novel Antibody-Transporter Conjugates for Brain Drug DeliveryR21EY018506 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI SHUSTA, ERIC V · 2007 to 2008
$397k
NEI NIH HHS EY018506NHGRI NIH HHS 5T32HG002760NINDS NIH HHS NS052649
6 · The paper itself

Abstract

High-throughput generation of antibodies against cellular components is currently a challenge in proteomics, therapeutic development and other biological applications. It is particularly challenging to raise antibodies that target membrane proteins due to their insolubility in aqueous solutions. To address these issues, a yeast display library of human single-chain antibody fragments (scFvs) was efficiently screened directly against detergent-solubilized and biotinylated lysates of a target cell line, thereby avoiding issues with membrane protein insolubility and eliminating the need for heterologous expression or purification of antigens. Antibody clones that specifically bind plasma membrane proteins or intracellular proteins were identified, depending on the biotinylation method applied. Antibodies against a predetermined target could also be identified using cell lysate as an antigen source as demonstrated by selecting an scFv against the transferrin receptor (TfR). When secreted from yeast and purified, the selected scFvs are active under physiological conditions in the absence of detergents. In addition, this method allows facile characterization of target antigens because it is compatible with yeast display immunoprecipitation. We expect that this method will prove useful for multiplex affinity reagent generation and in targeted antibody screens.

Indexed as

Peptide LibraryAnimalsBlotting, WesternCell ExtractsCell LineEpitopesFlow CytometryHigh-Throughput Screening AssaysHumansImmunohistochemistryImmunoprecipitationMembrane ProteinsRatsReceptors, TransferrinSaccharomyces cerevisiaeSingle-Chain AntibodiesCell ExtractsEpitopesMembrane ProteinsPeptide LibraryReceptors, TransferrinSingle-Chain Antibodies

Identifiers

PMID20498037
PMCPMC2920304
OpenAlexW2119505722

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.