ArticleBioinformatics (Oxford, England)2010
FuncBase: a resource for quantitative gene function annotation.
Article in Bioinformatics (Oxford, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
11 citing papers in PubMed.
- LRBA deficiency impairs autophagy and contributes to enhanced antigen presentation and T-cell dysregulation.EMBO reports · 2025Article
- From beer to breadboards: yeast as a force for biological innovation.Genome biology · 2024Review
- Application of comparative biology in GO functional annotation: the mouse model.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- Novel cardiovascular gene functions revealed via systematic phenotype prediction in zebrafish.Development (Cambridge, England) · 2014Article
- GeneMANIA prediction server 2013 update.Nucleic acids research · 2013Article
- A Resource of Quantitative Functional Annotation for Homo sapiens Genes.G3 (Bethesda, Md.) · 2012Article
- PILGRM: an interactive data-driven discovery platform for expert biologists.Nucleic acids research · 2011Article
- Differential expression of a set of genes in follicular and classic variants of papillary thyroid carcinoma.Endocrine pathology · 2011Article
- TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information.BMC bioinformatics · 2010Article
- Chromosome 9p21 in sporadic amyotrophic lateral sclerosis in the UK and seven other countries: a genome-wide association study.The Lancet. Neurology · 2010Article
- Article
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
summaryComputational gene function prediction can serve to focus experimental resources on high-priority experimental tasks. FuncBase is a web resource for viewing quantitative machine learning-based gene function annotations. Quantitative annotations of genes, including fungal and mammalian genes, with Gene Ontology terms are accompanied by a community feedback system. Evidence underlying function annotations is shown. For example, a custom Cytoscape viewer shows functional linkage graphs relevant to the gene or function of interest. FuncBase provides links to external resources, and may be accessed directly or via links from species-specific databases. AVAILABILITY: FuncBase as well as all underlying data and annotations are freely available via http://func.med.harvard.edu/
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.