Evidence map›Paper›PMID 20491544›Full record

ArticleStem cells and development2011

Homologous recombination conserves DNA sequence integrity throughout the cell cycle in embryonic stem cells.

Lourdes Serrano, Li Liang, Yiming Chang, Li Deng, Christopher Maulion, Son Nguyen, Jay A Tischfield

Open access · greenAbstract read
In one paragraph

Article in Stem cells and development, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 69 citations in OpenAlex.

  1. Phosphorylation and DNA damage resolution coordinate SOX2-mediated reprogramming in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Review
  4. Article
  5. Tools used to assay genomic instability in cancers and cancer meiomitosis.Journal of cell communication and signaling · 2022
    Review
  6. Article
  7. Regulation and coordination of the different DNA damage responses inFrontiers in cell and developmental biology · 2022
    Review
  8. Review
  9. Article
  10. Stage-Specific Effects of Ionizing Radiation during Early Development.International journal of molecular sciences · 2020
    Review
  11. DNA repair fidelity in stem cell maintenance, health, and disease.Biochimica et biophysica acta. Molecular basis of disease · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Lourdes SerranoDepartment of Genetics, Human Genetics Institute, Rutgers, The State University of New Jersey, Piscataway, New Jersey 08854-8082, USA.
Li Liang
Yiming Chang
Li Deng
Christopher Maulion
Son Nguyen
Jay A Tischfield
Rutgers, The State University of New Jersey · US

Funding

TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Chang S Chan · 1997 to 2026
$94.5M
Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI ROBERT John LAUMBACH · 1988 to 2026
$47.4M
Mouse Model for Chemical and Radiation MutagenesisR01ES011633 · NIEHS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI TISCHFIELD, JAY ARNOLD · 2002 to 2006
$1.9M
NCI NIH HHS P30 CA072720NIEHS NIH HHS ES011633NIEHS NIH HHS P30ES005022
6 · The paper itself

Abstract

The maintenance of genomic integrity is crucial to embryonic stem cells (ESC) considering the potential for propagating undesirable mutations to the resulting somatic and germ cell lineages. Indeed, mouse ESC (mESC) exhibit a significantly lower mutation frequency compared to differentiated cells. This could be due to more effective elimination of genetically damaged cells via apoptosis, or especially robust, sequence-conserving DNA damage repair mechanisms such as homologous recombination (HR). We used fluorescence microscopy and 3-dimensional image analysis to compare mESC and differentiated cells, with regard to HR-mediated repair of spontaneous and X-ray-induced double-strand breaks (DSBs). Microscopic analysis of repair foci, flow cytometry, and functional assays of the major DSB repair pathways indicate that HR is greater in mESC compared to fibroblasts. Strikingly, HR appears to be the predominant pathway choice to repair induced or spontaneous DNA damage throughout the ESC cycle in contrast to fibroblasts, where it is restricted to replicated chromatin. This suggests that alternative templates, such as homologous chromosomes, are more frequently used to repair DSB in ESC. Relatively frequent HR utilizing homolog chromosome sequences preserves genome integrity in ESC and has distinctive and important genetic consequences to subsequent somatic and germ cell lineages.

Indexed as

DNA RepairRecombination, GeneticAnimalsCell CycleCells, CulturedDeoxyuridineDNADNA Breaks, Double-StrandedDNA DamageEmbryonic Stem CellsFibroblastsHistonesMiceRad51 Recombinase5-ethynyl-2'-deoxyuridineDeoxyuridineDNAgamma-H2AX protein, mouseHistonesRad51 protein, mouseRad51 Recombinase

Identifiers

PMID20491544
PMCPMC3128761
OpenAlexW2053549853

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.