Evidence map›Paper›PMID 20491065›Full record

ArticleChemistry & biodiversity2010

Gene network analysis during early infection of human coronary artery smooth muscle cells by Trypanosoma cruzi and Its gp83 ligand.

Pius N Nde, Candice A Johnson, Siddharth Pratap, Tatiana C Cardenas, Yuliya Y Kleshchenko, Vyacheslav A Furtak, Kaneatra J Simmons, Maria F Lima, Fernando Villalta

Open access · greenAbstract read
In one paragraph

Article in Chemistry & biodiversity, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Transcriptional Studies onFrontiers in cellular and infection microbiology · 2021
    Review
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Pius N NdeDepartment of Microbiology and Immunology, School of Medicine, Meharry Medical College, 1005 Dr. D. B. Todd Jr. Blvd., Nashville, TN 37208-3599, USA.
Candice A Johnson
Siddharth Pratap
Tatiana C Cardenas
Yuliya Y Kleshchenko
Vyacheslav A Furtak
Kaneatra J Simmons
Maria F Lima
Fernando Villalta
Meharry Medical College · US

Funding

VITAMIN D DEFICIENCY AND INCREASED RISK OF UTERINE FIBROIDS IN AFRICAN AMERICANSG12RR003032 · NCRR · MEHARRY MEDICAL COLLEGE · PI HOLT, ROBERT G · 1985 to 2011
$27.4M
Technologies and Resources CoreU54MD007593 · NIMHD · MEHARRY MEDICAL COLLEGE · PI ADUNYAH, SAMUEL EVANS · 2012 to 2018
$24.7M
THE MEHARRY RISE INITIATIVER25GM059994 · NIGMS · MEHARRY MEDICAL COLLEGE · PI MOTLEY-JOHNSON, EVANGELINE D · 1999 to 2021
$23.0M
TECHNOLOGIES AND RESOURCES FOR CORE LABORATORIESU54RR026140 · NCRR · MEHARRY MEDICAL COLLEGE · PI GOODWIN, JEFFREY SHAWN · 2009 to 2011
$12.9M
MOLECULAR PARASITOLOGY TRAINING PROGRAMT32AI007281 · NIAID · MEHARRY MEDICAL COLLEGE · PI NDE, PIUS N · 1985 to 2025
$3.2M
Molecular Analysis of Trypanosome InfectionSC1AI080580 · NIAID · MEHARRY MEDICAL COLLEGE · PI VILLALTA, FERNANDO · 2008 to 2010
$1.1M
Novel trypanosome receptor for thrombospondin-1SC2AI083925 · NIAID · MEHARRY MEDICAL COLLEGE · PI NDE, PIUS N · 2009 to 2011
$435k
NCRR NIH HHS 1U54RR026140-0109.NCRR NIH HHS 5G12RR003032-25NCRR NIH HHS G12 RR003032NCRR NIH HHS U54 RR026140NIAID NIH HHS 1SC2AI083925-01NIAID NIH HHS 2T32AI007281-21NIAID NIH HHS 5SC1 AI080580-03NIAID NIH HHS SC1 AI080580NIAID NIH HHS SC2 AI083925NIAID NIH HHS T32 AI007281NIGMS NIH HHS 5R25GM059994-10NIGMS NIH HHS 5R25GM059994-SNIGMS NIH HHS R25 GM059994NIMHD NIH HHS U54 MD007593
6 · The paper itself

Abstract

Trypanosoma cruzi, the causative agent of Chagas' disease, infects heart and muscle cells leading to cardiac arrest, followed by death. The genetic architectures in the early T. cruzi infection process of human cells are unknown. To understand the genetic architectures of the early invasion process of T. cruzi, we conducted gene transcription microarray analysis, followed by gene network construction of the host cell response in primary human coronary artery smooth muscle (HCASM) cells infected with T. cruzi or exposed to T. cruzi gp83, a ligand used by the trypanosome to bind host cells. Using seven RT-PCR verified up-regulated genes (FOSB, ATF5, INPP1, CCND2, THBS1, LAMC1, and APLP2) as the seed for network construction, we built an interaction network of the early T. cruzi infection process containing 165 genes, connected by 598 biological interactions. This interactome network is centered on the BCL6 gene as a hub. Silencing the expression of two seed genes (THBS1 and LAMC1) by RNAi reduced T. cruzi infection. Overall, our results elucidate the significant and complex process involved in T. cruzi infection of HCASM cells at the transcriptome level. This is the first elucidation into the interactome network in human cells caused by T. cruzi and its gp83 ligand.

Indexed as

Gene Regulatory NetworksCoronary VesselsGene Expression ProfilingHumansLigandsMyocytes, Smooth MuscleOligonucleotide Array Sequence AnalysisProtozoan ProteinsRNA InterferenceTranscription, GeneticTrypanosoma cruziUp-RegulationLigandsProtozoan Proteins

Identifiers

PMID20491065
PMCPMC2910116
OpenAlexW2063012400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.