Evidence map›Paper›PMID 20490737›Full record

ArticlePathology oncology research : POR2010

High resolution melting curve analysis of DNA sequence alterations of various sizes.

Péter Becságh, Katalin Varga, Orsolya Szakács, László Kopper, Zsolt Orosz

Abstract read
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In one paragraph

Article in Pathology oncology research : POR, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Mechanisms of Sporicidal Activity Induced by Ionized Hydrogen Peroxide in the Spores ofApplied biosafety : journal of the American Biological Safety Association · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Péter BecsághRoche Hungary Ltd, Budaörs, Hungary. peter.becsagh@roche.com
Katalin Varga
Orsolya Szakács
László Kopper
Zsolt Orosz
National Institute of Oncology · HUMagyar Madártani és Természetvédelmi Egyesület · HURoche (Hungary) · HUSemmelweis University · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the diagnostic workflow we need to think in algorithms, containing more assays. One of the most important task in the management of cancer patient is to detect nucleic acid sequence changes in clinical specimens. Before using the most expensive method to analyze direct our targets, a screening assay is needed to reduce the number of samples. In the detection of gene-sequence alterations classical screening methods are available, as SSCP, DGGE or TGGE, (Finke Exp Clin Endocrinol Diabetes 104:92-97, 1996; Lessa and Applebaum Mol Ecol 2:119-129, 1993) however these are very time consuming processes. At this time in the molecular lab the real-time PCR equipments are very popular and with the function of melting curve analysis it can be a very convenient, simple and cost-efficient screening method.

Indexed as

AlgorithmsBase SequenceDNA Mutational AnalysisDNA PrimersFreezingGastrointestinal Stromal TumorsHumansMolecular Sequence DataProto-Oncogene Proteins c-kitReverse Transcriptase Polymerase Chain ReactionDNA PrimersProto-Oncogene Proteins c-kit

Identifiers

PMID20490737
OpenAlexW2045770884

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.